Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01712 ATGGGTCGAGGGAAGATTGTGATAAGAAGGATTGATAATTCTGCAAGTAGACAAGTGACTTTCTCCAAGAGAAGAAAGGGATTAATTAAAAAGGCTAAAGAACTCTCTATTCTCTGTGATGCCGAAGTTGGTCTCATAATTTTTTCTAGCTCTGGCAAATACTATGAATTTGCAAGCACTAGCATACATTCAATAATTGAGAAATATAACAGAAGGAAGGAGGAAGATGAATTGCTGTTGAATCCAATTTCAGATGTAAAGTTATGGCAGAAGGAAGTAACAACTCTAAGGCAGCAACTACATAACTTGCAGGAGAATAACAGGAAATTAATGGGGGAGCAACTCTATGGTTTATCAATCAAAGACCTAAACAATCTTGAGAGCCAATTGGAGTTTAGCTTACAAAGCATCCGAATTAAAAAGGAACAAATATTAAATGATGAAATAAAAGAATTGAATCGAAAGGGAATTCTGATGCACCAAGAAAATATAGAGTTGACCAATAAAGTAAACCTTTATTGTCAAGAAAACATGGAATTACACAGAAAGGTTTATGGGCATGATTCAAGATCTGAGATGAACTTGGGCACCGGTAACGCCTTGATTCCATATGGTATTATCACCGCCGCCGCCGTCCCTATTGCAGGCGACGCCCTGCGTGTGCCAATCCATCTTCAGCTCAACCCGCCGGAGCAACAAACTTAA 705 38.72 MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKYYEFASTSIHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSIKDLNNLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQENIELTNKVNLYCQENMELHRKVYGHDSRSEMNLGTGNALIPYGIITAAAVPIAGDALRVPIHLQLNPPEQQT 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36092109 36096231 + XM_039026382.1 Bhi03g01712 30489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01712 234 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 Coils Coil 123 143 - -
Bhi03g01712 234 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 233 - -
Bhi03g01712 234 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi03g01712 234 SUPERFAMILY SRF-like 2 77 IPR036879 GO:0003677|GO:0046983
Bhi03g01712 234 Coils Coil 86 113 - -
Bhi03g01712 234 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi03g01712 234 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 233 - -
Bhi03g01712 234 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Bhi03g01712 234 Gene3D - 13 85 IPR036879 GO:0003677|GO:0046983
Bhi03g01712 234 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01712 Bhi-Chr3:36092109 Bhi09g02527 Bhi-Chr9:68307216 1.46E-87 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
715 PF01486 K-box 7.90E-24 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01712 K09264 - csv:101206453 426.017