Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01735 GTCACAAACAGCCTTTTATGGGAAAGTTTGGGCGATGAGTTGGAATTTTGCTTCCCCAGAAATGGAGACTTTCACTTCCTTTCAACTATAGCCTCATTCTCTTTCCGCTACTCATTGGTGGCTTTCCATCTTTCTGAAAAACGAACCCTAACCGTGTTTCCCTATCATAAAGCAAGGCTATAGCTAGTTATAGGGATTGAAATGGCGAAGGAGAAAATCCAGATCAGGAAGATCGACAACGCCACCGCGAGGCAGGTCACTTTCTCCAAGCGCCGGAGGGGACTTTTCAAGAAAGCTAAAGAGCTTTCCATTTTATGCGATGCCGATGTTGCCCTTATTATCTTCTCCGCCACTGGAAAGCTGTTTGAGTATTCCAGCTCAAGCATGAAGGGAATTATAGATAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGCTGGTTGAAAACAGCAATTACACCCGATTAAACAAGGAAATTGCTGAGAAAACTCATCAGCTAAGGCAGATGAGGGGAGAAGAACTCCAAACATTGAATATAGAAGAATTGCAACAGCTAGAGAAGTCACTGGAGTCAGGATTGAGCCGTGTGATGGAGAAAAAGGGTGAACAGATCATGAAAGAGATCACTGACCTTCAAAGAAAGTCGGCCGAGTTGATGGATGAGAATAAGCGACTGAAACAACAAGCGGAGAAAATGAACGGGGTGAGGCACCTGGGCGTCGAGCCCGAGATTTTGGTCGTGGAAGATGGCCAGTCGTCGAACTCCGTCACTGATGCGTGTGTCTCCAACTCCAATGGCCCCCCTCAAGATCTGGAAAGCTCAGACACATCTCTGAAACTAGGGCTGCCGTATTCCGGGTGATGGTGATGGAACAAGAAGATGAACAGGTACTGTAGAGCTAGAAAAAAAGGTAGTGTGTAAAAATAATTATACCCTAAAATTCGGGTTAGTTGAGTAATTGGAATCTAAATCTAACCCCATCTCATCTTGATTTTCCAATTCACATGACTCCGTTGAAATCTGAAAAAGGGTTGCATTTTTATGAATTCAATGCACCGTTTTAACCAATCAAA 1100 43.73 MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSILCDADVALIIFSATGKLFEYSSSSMKGIIDRHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTLNIEELQQLEKSLESGLSRVMEKKGEQIMKEITDLQRKSAELMDENKRLKQQAEKMNGVRHLGVEPEILVVEDGQSSNSVTDACVSNSNGPPQDLESSDTSLKLGLPYSG 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36537300 36541756 - XM_039027801.1 Bhi03g01735 30512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01735 228 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi03g01735 228 Pfam K-box region 92 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi03g01735 228 MobiDBLite consensus disorder prediction 191 228 - -
Bhi03g01735 228 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 225 - -
Bhi03g01735 228 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi03g01735 228 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi03g01735 228 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi03g01735 228 Coils Coil 94 114 - -
Bhi03g01735 228 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Bhi03g01735 228 Coils Coil 143 177 - -
Bhi03g01735 228 PANTHER MADS-BOX PROTEIN SVP ISOFORM X1 1 225 - -
Bhi03g01735 228 SUPERFAMILY SRF-like 3 85 IPR036879 GO:0003677|GO:0046983
Bhi03g01735 228 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Bhi03g01735 228 Coils Coil 121 141 - -
Bhi03g01735 228 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi03g01735 228 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi03g01735 228 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01733 Bhi-Chr3:36537300 Bhi03g01735 Bhi-Chr3:36537300 3.02E-168 dispersed
Bhi03g01735 Bhi-Chr3:36537300 Bhi03g01737 Bhi-Chr3:36537300 3.02E-168 dispersed
Bhi03g01734 Bhi-Chr3:36537300 Bhi03g01735 Bhi-Chr3:36537300 3.02E-168 tandem
Bhi03g01735 Bhi-Chr3:36537300 Bhi03g01736 Bhi-Chr3:36537300 3.02E-168 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
720 PF01486 K-box 1.50E-16 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01735 - - csv:101203152 428.328