Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi03g01774 | TCTTCAATCCTCCGCCCAACTTCTACATTCGTTGATTCAACCATTACAGCTTCTCCATTGACTACCATCATTATATTCCCAATCCACATTCCATTTCTCTCTTAATTCCTCAATTAGTTTCATTATACTCGAATTTCTTTCACAATCGCCATTCCAATACAGGGTAAAAAAATCTCACAATGAACGATCTGTTCTCCACAGATTCCTTCCGCCGCGAGCAGCATCAGCACCCCCATTACTCCGTCGAGATGTCCGTCGACGCGCCGTCGTCAACAACGATCAATCTCAACAGCTTCTTCGACGACGTGGAGTCCGTGAAAGCAGAATTAACGGAGCTCGATCGGCTCCATCGAAGCCTCCAGAATTCCCACGAACAGAGCAAAACTCTGCACAATTCGAAGGCGATTAAGGATCTCCGATCGCGAATGGAATCGGATGTAACTTTAGCTCTGAAGAAGGCTAGGTTTATCAAGCTCCGGTTGGAGGAACTGGACCGGTCCAATGCAGAGAACCGGAATCTTCCTGGTTGTGGCTATGGCTCCTCCGCCGACCGGTCGAGAAGTTCCGTTGTCAATGGATTGAGGAAGAAGCTGTGTGATTCGATGGAGAGCTTTAACAGATTGAGAGAGGAGATTTCGAAGACGTATAAGGAGACGATTGAACGGAGGTATTTTACAATTACAGGGGAAAATCCTGATGAGAAGACTGTTGATTTGTTGATCTCTACAGGCGAAAGCGAAACATTCTTGCAAAAGGCAATACAAAAGCAAGGAAGAGGCAGAGTTTTGGAAACAATCCAAGAGATTCAAGAAAGGCACGACGCAGTGAAAGACATAGAGAAGAATTTGAGAGAGCTACACCAAGTTTTCATGGACATGGCGGTGCTGGTTCAAGCGCAGGGGCAGCAGTTGGATGACATTGAAAGCCAAGTTACTCGAGCCAACTCCGCCGTCAAGCGTGGCACAACGGAGCTACAAACTGCAAGATACTACCAGAAAAATACCCGCAAATGGATCTGTATAGGCGTCAGTGTTCTTGCAGTCATTCTCTTCATTATTATCATCTCTGTCGTCCTCTCAAAGAAGAAGAACAACAACTAGCTACTGGTCGGTTGCCTTCAGTTCGGGTTGTCGTCACTGGTGCTCTTAGCTTGGTCGTGCACATTAGTTCGTGAGTTGACTTCACCGGTATTCGTGGGTTTTCGGTTAGTTTTCTCGGCGTGTGGGTGTTCCTGTGGGTTGTCGTCACCGGTTTTCCTTAGATCTCTATCGTCGTGGGCTTCTTCCAGTGGTGGGTCATCGTCGTGGGTGTTCTCCAGTTGCTTTTGGTTGGTTTCCGTCGGCGCGTGGGCTTTCTCGGAGTGTTCTTTGCTGGCGTGCGTGGGTTGTCCGATGGGTCGCGTGGTTTGTCCGGTTGTTCATGTGGTTTGCCCCGTTGTTCGAGTGTTCATTGTCCGGTGGGTTGTCCGGTTGCTTTCGTGGGGTTTTGATTTGTCAGATCAGTGAGCTTTTAGTTTTTTGTCAGCGCGTGGGCTTTCGGTGGTTCCGATCGTAG | 1554 | 48.2 | MNDLFSTDSFRREQHQHPHYSVEMSVDAPSSTTINLNSFFDDVESVKAELTELDRLHRSLQNSHEQSKTLHNSKAIKDLRSRMESDVTLALKKARFIKLRLEELDRSNAENRNLPGCGYGSSADRSRSSVVNGLRKKLCDSMESFNRLREEISKTYKETIERRYFTITGENPDEKTVDLLISTGESETFLQKAIQKQGRGRVLETIQEIQERHDAVKDIEKNLRELHQVFMDMAVLVQAQGQQLDDIESQVTRANSAVKRGTTELQTARYYQKNTRKWICIGVSVLAVILFIIIISVVLSKKKNNN | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 37337842 | 37341635 | - | XM_039027368.1 | Bhi03g01774 | 30551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi03g01774 | 306 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 206 | 268 | IPR000727 | - | |
Bhi03g01774 | 306 | Coils | Coil | 206 | 226 | - | - | |
Bhi03g01774 | 306 | ProSitePatterns | Syntaxin / epimorphin family signature. | 212 | 251 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bhi03g01774 | 306 | SMART | tSNARE_6 | 201 | 268 | IPR000727 | - | |
Bhi03g01774 | 306 | PANTHER | SYNTAXIN | 14 | 296 | IPR045242 | - | |
Bhi03g01774 | 306 | Pfam | SNARE domain | 243 | 294 | IPR000727 | - | |
Bhi03g01774 | 306 | CDD | SynN | 36 | 193 | IPR006011 | GO:0016020 | |
Bhi03g01774 | 306 | Coils | Coil | 43 | 63 | - | - | |
Bhi03g01774 | 306 | Gene3D | - | 201 | 300 | - | - | |
Bhi03g01774 | 306 | Gene3D | - | 34 | 166 | - | - | |
Bhi03g01774 | 306 | SMART | SynN_4 | 31 | 157 | IPR006011 | GO:0016020 | |
Bhi03g01774 | 306 | Pfam | Syntaxin | 38 | 241 | IPR006011 | GO:0016020 | |
Bhi03g01774 | 306 | CDD | SNARE_syntaxin1-like | 205 | 267 | - | - | |
Bhi03g01774 | 306 | PANTHER | SYNTAXIN-121 | 14 | 296 | - | - | |
Bhi03g01774 | 306 | SUPERFAMILY | t-snare proteins | 35 | 261 | IPR010989 | GO:0016020|GO:0016192 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g01774 | Bhi-Chr3:37337842 | Bhi08g01910 | Bhi-Chr8:54935454 | 3.97E-113 | dispersed | |
Bhi03g01774 | Bhi-Chr3:37337842 | Bhi03g01775 | Bhi-Chr3:37339051 | 0 | tandem | |
Bhi03g02299 | Bhi-Chr3:50565201 | Bhi03g01774 | Bhi-Chr3:37337842 | 4.12E-86 | transposed | |
Bhi06g01461 | Bhi-Chr6:44337557 | Bhi03g01774 | Bhi-Chr3:37337842 | 5.35E-06 | transposed | |
Bhi11g00014 | Bhi-Chr11:223022 | Bhi03g01774 | Bhi-Chr3:37337842 | 2.38E-14 | transposed | |
Bhi11g01551 | Bhi-Chr11:44646765 | Bhi03g01774 | Bhi-Chr3:37337842 | 4.25E-100 | transposed | |
Bhi11g02367 | Bhi-Chr11:64444391 | Bhi03g01774 | Bhi-Chr3:37337842 | 1.70E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi03g01774 | K08486 | - | csv:101213443 | 509.605 |