Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g01775 | TCTTCAATCCTCCGCCCAACTTCTACATTCGTTGATTCAACCATTACAGCTTCTCCATTGACTACCATCATTATATTCCCAATCCACATTCCATTTCTCTCTTAATTCCTCAATTAGTTTCATTATACTCGAATTTCTTTCACAATCGCCATTCCAATACAGGGTAAAAAAATCTCACAATGAACGATCTGTTCTCCACAGATTCCTTCCGCCGCGAGCAGCATCAGCACCCCCATTACTCCGTCGAGATGTCCGTCGACGCGCCGTCGTCAACAACGATCAATCTCAACAGCTTCTTCGACGACGTGGAGTCCGTGAAAGCAGAATTAACGGAGCTCGATCGGCTCCATCGAAGCCTCCAGAATTCCCACGAACAGAGCAAAACTCTGCACAATTCGAAGGCGATTAAGGATCTCCGATCGCGAATGGAATCGGATGTAACTTTAGCTCTGAAGAAGGCTAGGTTTATCAAGCTCCGGTTGGAGGAACTGGACCGGTCCAATGCAGAGAACCGGAATCTTCCTGGTTGTGGCTATGGCTCCTCCGCCGACCGGTCGAGAAGTTCCGTTGTCAATGGATTGAGGAAGAAGCTGTGTGATTCGATGGAGAGCTTTAACAGATTGAGAGAGGAGATTTCGAAGACGTATAAGGAGACGATTGAACGGAGGTATTTTACAATTACAGGGGAAAATCCTGATGAGAAGACTGTTGATTTGTTGATCTCTACAGGCGAAAGCGAAACATTCTTGCAAAAGGCAATACAAAAGCAAGGAAGAGGCAGAGTTTTGGAAACAATCCAAGAGATTCAAGAAAGGCACGACGCAGTGAAAGACATAGAGAAGAATTTGAGAGAGCTACACCAAGTTTTCATGGACATGGCGGTGCTGGTTCAAGCGCAGGGGCAGCAGTTGGATGACATTGAAAGCCAAGTTACTCGAGCCAACTCCGCCGTCAAGCGTGGCACAACGGAGCTACAAACTGCAAGATACTACCAGAAAAATACCCGCAAATGGATCTGTATAGGCGTCAGTGTTCTTGCAGTCATTCTCTTCATTATTATCATCTCTGTCGTCCTCTCAAAGAAGAAGAACAACAACTAGCTAGTAAGCATTCGAATGCATCAAAGCCAAATGATTATCAAATTAAACTTTAATTATTTTCTCAAAATTTAAACAAAGTTGCTTTTTGTGGATTGATGGTGTGTATTCTGTTTTTATTTCGTATTAGAGCAAAAGATCATAACTCTGT | 1248 | 43.83 | MNDLFSTDSFRREQHQHPHYSVEMSVDAPSSTTINLNSFFDDVESVKAELTELDRLHRSLQNSHEQSKTLHNSKAIKDLRSRMESDVTLALKKARFIKLRLEELDRSNAENRNLPGCGYGSSADRSRSSVVNGLRKKLCDSMESFNRLREEISKTYKETIERRYFTITGENPDEKTVDLLISTGESETFLQKAIQKQGRGRVLETIQEIQERHDAVKDIEKNLRELHQVFMDMAVLVQAQGQQLDDIESQVTRANSAVKRGTTELQTARYYQKNTRKWICIGVSVLAVILFIIIISVVLSKKKNNN | 306 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 37339051 | 37341635 | - | XM_039027366.1 | Bhi03g01775 | 30552 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g01775 | 306 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 206 | 268 | IPR000727 | - | |
| Bhi03g01775 | 306 | Coils | Coil | 206 | 226 | - | - | |
| Bhi03g01775 | 306 | ProSitePatterns | Syntaxin / epimorphin family signature. | 212 | 251 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
| Bhi03g01775 | 306 | SMART | tSNARE_6 | 201 | 268 | IPR000727 | - | |
| Bhi03g01775 | 306 | PANTHER | SYNTAXIN | 14 | 296 | IPR045242 | - | |
| Bhi03g01775 | 306 | Pfam | SNARE domain | 243 | 294 | IPR000727 | - | |
| Bhi03g01775 | 306 | CDD | SynN | 36 | 193 | IPR006011 | GO:0016020 | |
| Bhi03g01775 | 306 | Coils | Coil | 43 | 63 | - | - | |
| Bhi03g01775 | 306 | Gene3D | - | 201 | 300 | - | - | |
| Bhi03g01775 | 306 | Gene3D | - | 34 | 166 | - | - | |
| Bhi03g01775 | 306 | SMART | SynN_4 | 31 | 157 | IPR006011 | GO:0016020 | |
| Bhi03g01775 | 306 | Pfam | Syntaxin | 38 | 241 | IPR006011 | GO:0016020 | |
| Bhi03g01775 | 306 | CDD | SNARE_syntaxin1-like | 205 | 267 | - | - | |
| Bhi03g01775 | 306 | PANTHER | SYNTAXIN-121 | 14 | 296 | - | - | |
| Bhi03g01775 | 306 | SUPERFAMILY | t-snare proteins | 35 | 261 | IPR010989 | GO:0016020|GO:0016192 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g01775 | Bhi-Chr3:37339051 | Bhi11g02367 | Bhi-Chr11:64444391 | 9.88E-148 | dispersed | |
| Bhi11g00014 | Bhi-Chr11:223022 | Bhi03g01775 | Bhi-Chr3:37339051 | 2.38E-14 | dispersed | |
| Bhi03g01774 | Bhi-Chr3:37337842 | Bhi03g01775 | Bhi-Chr3:37339051 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g01775 | K08486 | - | csv:101213443 | 509.605 |