Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01779 CCTTCATTTTTTCGTCCAGCATTTCGACGGGAGACCTGAAAAAGGCGAAAAAAAGGCAACAGAAGCTTTCGCATGGCTGAATTCTGTATCTGAATCGGCTTCTTCGTCGTGATCACGCTCCGCTCTCCCATACCACACCACATTGGGAGGGAAAAACTTCCATCTCCAATGGGGGTTCCACAGACCATGGAAATTCTGACCGAGAGAGCCGCACTTGTCCGAGAGTCGCTTCAAAAGAGCCAGAATGTCACCGAGAGCATGGTCTCCATTCTTGGCTCTTTCGACTACCGTCTCTCCGCCCTAGAAACCGCAATGCGTCCTACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGGCTGCAGAAAGTATGCTAGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAAATGTACTTGGAAGCAATTGATCAATTACGAAGCACAAATTGCTACTTTACTGGGAACAAAATTTTCAAATGTAACGATGCTATTCTTACCCACACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGTTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCTGATCGTCTGTTCGATTGCCTCCCCAACTCTTTGCGTCCATCATCAGCATCTGTGCAGCATGGGGATAGTGGTAGCAAAAATAATTCTGACCATCAGAACAAAAGCTTAGAAGCTGCCATCTTCGTTCCTCCAACTCTTATTCCACCCAGGGTTCTTCCGTTGTTGCATGATTTGGCTCAACAAATGATTCTGGCTGGTCATCAGCAGCAACTGTTTAGAATATACAGGGATACTCGCTCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGTAACTGGATACATTACATGCGCATTGCTGTCAAATTGCTGTTTGCTGGGGAAAGGAAAATCTGTGATCAAATTTTTGACGGTGCAGACTCTCTCCAGGACCAATGCTTCGCTGATGTGACTTCAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGAGGCAATTGCCAGAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTATGAAATAATGCGAGAACTGCAGTCTGAGATTGAAACACTTTTTGGAAGTAAAGCATGCGTTGAAATGCGGGATTCTGCATTGAGCTTAACAACACGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAATTACGTCAAGTTTTTGTTTGACTACCAATCTACTCTGAAGCAGCTATTCCAAGATTTTGACGCTAGTGATCCAGATGCTCAGATAGCAGTGGTAACCACAAGAATCATGCAGGCCCTTCAGACTAATCTTGATGGGAAATCTAAGCAATATAGGGATCCTGCACTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCCGTCCGGAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCCAAGATTTTGCAGTGCCTTACAGTTCAGGCCTCAGGTAGTGGTGGTGCTTCGGGAGATGGTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTTAAGACTTTTAACATCCAATTTGAAGAACTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGGGAGTCGTTGAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCCTACCGATCCTTCATCAAGCGTTTCGGGCCTATGATTGAGAATGGGAAAAATCCTCAAAAATATATCAGATATTCACCCGAGGATCTCGAGCGCATGCTAAATGAATTTTTCGAGGGCAAGACATTCAGTGAGCAAAAGCGCTAGTAGCTTCTCAAAATGCTCTGTAAATGGACAAAGTTAGAGCAGGTACTCCCCCCTCCCCGTTCTTTTCTTCTCTACAAATTGTATCATTTGATTCTGTCTTCCATTTGCGGATATTTTCCACATTTACATGCTCTTAGCGCAGTTGCTAGCAGTATGATAAGTCCTTCCTATTGCAGGCAGCCAGATTTTTTCTTAATGGTCTTGTTGTGTATATGTCAATTTACTCTCTCGATCCTGCCTCTTAACTTATAGTAGTACATAGGAAACTATTCAAAGTTGTGTTTA 2370 43.38 MGVPQTMEILTERAALVRESLQKSQNVTESMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNCYFTGNKIFKCNDAILTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASVQHGDSGSKNNSDHQNKSLEAAIFVPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRDTRSSVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGADSLQDQCFADVTSNSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELQSEIETLFGSKACVEMRDSALSLTTRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDFDASDPDAQIAVVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASGDGSSGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPQKYIRYSPEDLERMLNEFFEGKTFSEQKR 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37436017 37443795 + XM_039025306.1 Bhi03g01779 30556

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01779 638 SUPERFAMILY Cullin repeat-like 76 629 IPR016159 -
Bhi03g01779 638 Gene3D Exocyst complex component Exo70 75 638 - -
Bhi03g01779 638 Pfam Exo70 exocyst complex subunit 273 626 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi03g01779 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 635 IPR004140 GO:0000145|GO:0006887
Bhi03g01779 638 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 635 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01779 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:105436019 1197.96
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01779 Bhi-Chr3:37436017 Bhi07g00686 Bhi-Chr7:26421450 0 dispersed
Bhi09g00242 Bhi-Chr9:5159378 Bhi03g01779 Bhi-Chr3:37436017 2.35E-52 dispersed
Bhi03g01779 Bhi-Chr3:37436017 Bhi10g00657 Bhi-Chr10:14435507 3.42E-94 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g903 Blo01g01242 . . . . . . . . . . Cma07g00826 Car03g01010 Car07g00813 Sed14g0274 Cpe10g00315 . Bhi03g01779 Tan03g1260 Cmetu08g1948 . Hepe04g1072 . . . . . . . . . . . Cone13ag1144 Cone19ag1123 Lsi01g01185 Csa06g02721 Chy08g00976 . . . . . . . Bma01g02005 . . Cmo03g01110 Cmo07g00855 . . . . . Cpe19g00500 . . . . . . . . . . . . . . . . . Cme08g01155
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001390 3 2 2 2 2 2 4 2 2 2 2 2 4 2 2 4 2 5 4 2 3 1 2 2 2 2 2 4 2 2 74