Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01787 TTCCCTCCACATCCATCTAAACAAATTTCCCTCCTCCCATCTAAAAAAGGCTACCAAAATGCTATTCCCTTAATCTCCACTTTGATCTCACAACCCTATTCCTCTTCTTCTTCCTCATCTTCTCAACTTTCATCCCATTTCCTTCTTCCATCATCTCCTCATAATTTCCTGTAAATTTCAATATTTTTCCATTCCTCCTGGCCTTTGGATCCTCCATGCGCGGCGGCTCTCGAGCTCCGAACCGGTCGGAGCCACTGCCTCAGTCCCAAACTGCCCAGATCCTGCCGCCTCTCAACCGCCACCTTGCTTTTGACTCCGCTAAGCCGCCGTTTGTTCCTCCGGGTCATTATTACCACTTCGGTGACGGTTCTTCCAATGTTATTGATCAACAACCTGATTCCATCGTTGTTAAACCTCTCAAACCAAAGCAGAAGGGTGCCATGTATAACAACATGGTTGAATTGAATGACTATATTCATGATCAGGGATCTTCAAAAGATGCCCTCAGTTCTGTTCAGACACCCATGTCTGTAAAAGGAGGAAGGGTGTACAATAAGTCAAAGACTTCAAGGAAAACTACATCTGGGCCTCAAACACCTATCTCAGACACTAGCACTTATTCTCCCCTTACTCCTGCTGGAAACTGTCGATATGACAGTTCTTTAGGTCTTCTGACAAAAAAATTCATCAATTTGATTAAGCAAGCAAGGGATGGCATTCTTGACTTGAACAAAGCTGCAGAAACTTTGCAGGTGCAGAAAAGGAGAATATATGACATAACAAATGTTTTGGAAGGCATAGGTCTCATAGAAAAGAAGCTGAAAAACATCATATATTGGAAAGGATTTAGTCAACAAATTCCAGGAAATGTGGATAGTGATACTTCAATGTTACAGGTGGATGTTGAAAACCTTTCTTTTGAAGAGCGTAGATTAGATGATAAGATAAGAGCAATGCAGGAAAGACTGAGGAATCTGAGTGAAGACGAAAATATCCAAAAGTGGCTCTTCGTGACAGAAGAAGACATTAAAAACTTGCCTTGCTTTCAGAATGAAACACTGATAGCAATTAAAGCTCCTCATGGAACCACATTGGAAGTTCCTGATCCTGATGAAGCTGTTGATTATCCACAGAGAAGATATAGGATAGTTCTTAGGAGTACGATGGGTCCTATTGATGTATATCTTGTCAGTCAATTTGAGGAAAAGTTTGAGGAGATGAATGTGGTCCAGCCACCTAGTAGCTTCCTACATGCTTCCAGTTCTGGATCAAATGAACATCTAACAACAGAAGCAATCATTGGGGAGAGTAGTAGAAATGAAATTGAACCTCAAGCTCATCTATCCCAACACAGCAGCAGCTGTGATGTTAATGGTTCAAATGAGTTTCCTGGTGGAATGATGAAGATTATTCCTTCAGATGTTGATAATGATGCGGATTACTGGTTGTTATCGGATGCTGAAGTTAGCATTACAGATATGTGGAGAACAGATTATATTGCATGGGATCAATCAGATATGGTTCCTCATGACTTTTTAATATCTGATGTCAGTGCCCAAAGGCCAAGACCAGGAAGTCCACATTCAGAGACAGCTGAAGCACCGTCTGATGTTAACTTAAGACAGAGGTGACAAAGGAACAGATCTCACCTTAATTCATCAGTGATCTGTTCCCATCCTCATTAATCCACAAGATGTTGATTTGTAGCCAAACAATCAGTTGAATTTGACTAGAACTCGCGCTCAACTGTACAGTGTAATTTTATGGCCCAAGTAATATATCGGGAAAATTTTCCAAGCATGGTATACAATACAATTTTCAGAGCTAGTCGGGCGGCAAGTTTAGAGGAAATAGAAACAAACTTTTGTAAGGTTGCAGATGGGCGGAAGCATGTAAGATAGGTTTCCAGACATTAACAGGCCGGCAAGAACTTCAATGCATCGAAGTCCGAGGATTGGCCGTCATCTACTTCCGCCGTCTCCGAATCGACGCGGCTGATTCCGACGATGAACTGCGGTGCGGCTCTCGGAGAATCGTTTGTCTGATCGGCGGATCGGGCGGAAAACGACGGCAATTTGTTCGGTGGCGGTGGTGACGTTATCGGCGGTTGCTGTTGCTGATCGTTTCTCTGTAATTAAAGTGAGAATAATTAGAGAAAATGTGAAGAATTAGTCATGGGAATGGCGCTATAATAAATTGCCATTAATGGCGATGATACTGAAATGAGTGAAGGCTTTCAATCACGATGAATCCTAATTGTGTTCAATTTGAACGCTTAGAATTTATTAAAATTTTTTAAAAAAAAGGTTAAATCGTAATTCGCAAATTAGGGCACAA 2337 41.59 MRGGSRAPNRSEPLPQSQTAQILPPLNRHLAFDSAKPPFVPPGHYYHFGDGSSNVIDQQPDSIVVKPLKPKQKGAMYNNMVELNDYIHDQGSSKDALSSVQTPMSVKGGRVYNKSKTSRKTTSGPQTPISDTSTYSPLTPAGNCRYDSSLGLLTKKFINLIKQARDGILDLNKAAETLQVQKRRIYDITNVLEGIGLIEKKLKNIIYWKGFSQQIPGNVDSDTSMLQVDVENLSFEERRLDDKIRAMQERLRNLSEDENIQKWLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEMNVVQPPSSFLHASSSGSNEHLTTEAIIGESSRNEIEPQAHLSQHSSSCDVNGSNEFPGGMMKIIPSDVDNDADYWLLSDAEVSITDMWRTDYIAWDQSDMVPHDFLISDVSAQRPRPGSPHSETAEAPSDVNLRQR 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37668908 37681683 + XM_039027372.1 Bhi03g01787 30564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01787 471 Pfam E2F transcription factor CC-MB domain 226 326 IPR032198 GO:0046983
Bhi03g01787 471 Gene3D - 217 327 - -
Bhi03g01787 471 Gene3D - 139 212 IPR036388 -
Bhi03g01787 471 SUPERFAMILY E2F-DP heterodimerization region 224 327 IPR037241 -
Bhi03g01787 471 MobiDBLite consensus disorder prediction 95 140 - -
Bhi03g01787 471 SUPERFAMILY Winged helix DNA-binding domain 145 208 IPR036390 -
Bhi03g01787 471 Coils Coil 230 257 - -
Bhi03g01787 471 SMART E2F_TDP_2 145 210 IPR003316 GO:0005667|GO:0006355
Bhi03g01787 471 PANTHER TRANSCRIPTION FACTOR E2FB 24 459 - -
Bhi03g01787 471 MobiDBLite consensus disorder prediction 446 471 - -
Bhi03g01787 471 Pfam E2F/DP family winged-helix DNA-binding domain 147 210 IPR003316 GO:0005667|GO:0006355
Bhi03g01787 471 PANTHER TRANSCRIPTION FACTOR E2F 24 459 IPR015633 GO:0000978|GO:0006357
Bhi03g01787 471 CDD E2F_DD 226 327 IPR032198 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01787 Bhi-Chr3:37668908 Bhi10g00182 Bhi-Chr10:3975320 8.21E-176 dispersed
Bhi03g01786 Bhi-Chr3:37668908 Bhi03g01787 Bhi-Chr3:37668908 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
729 PF16421 E2F_CC-MB 3.90E-33 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01787 K06620 - csv:101212480 765.377