Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01899 AGGAGTTTTCGCCCAAAAAATTGTAGTTTTGCCAATTTCCGAGCAAATTAGTGCACACCCTCCGGCCCAACGCGCGCACGTTATTCGCAGACACACGAAGCTCTCGCGTCTCTTCTTTCTCTCGAGCCGCTCACTCACCACATCCCAGTGGCTACTGTACTTAGACAGCATATCAGACTGGTGGCGGCACTAAAGTTTCTGAGTAGCCATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGAGCTGGTTTGCCGGTACAAAGCTGCTAACCAGAGAGCAATTGAAGCTCTGGAGAAGTTTGGAGCGACACTAATGGAAGTAGATGCTGATGGATCATTGTCATATCCAGAACCTCAGATAAATTCAAAAGACAATGCTGACAAACATTCTCGCCCCAAATCGTTGAGTATTGAAGAAGATCAATTTATGCGAGTATTTTATGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTCAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGACCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGTAACAGCATCATTGGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCGTTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAACTCTACGAGCGTATAAATTCAATTGAATCGTTGGTTAATAGATATGCCTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCGAAGAAGAGTTCAAATGAAATGCAAAAAATGCCTTTGCACAATTAGCTGTAGCTCAGCCTTGGCGTTGGGCAATGAGTTTGGTTTATGAAACAAACATCCTTGAGCCGCGTTCAACGTGAAAATATGGAAAAAGGAAAACATCATATCAAAGCACAGATGAAATTTGCCCCCTCTTTGGTACTCATTCTCTGATTTTATTCTTTTCTTCAGTCAGCAATATTTCTGGTCAGTGACCAAAAAATTTCTGTCATGTAATGATATCATTGTGACAAAATTTTGAATATCAGACTTATTCTGTCCTAGATTTTATTTCTTATTTTGTTTTGAGGATGGAAGAGCTTTTTCATCTCCTTTCCTTCGGAATGCGGGAGGGAATCTCATCTTCCTGATTTTAATTATTTTTTTAGGTTCTATTCCAACTCTTTCAGTCTTTCTCCATTGAATATATCTTACCATAAAGAAAGAAAAAGGAGGGAAAAAAACAACTTAAATACAATTATTTTTCTGTTCTGTT 1676 39.26 MADFQTSTQRAKWILSPQELVCRYKAANQRAIEALEKFGATLMEVDADGSLSYPEPQINSKDNADKHSRPKSLSIEEDQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQMLKVTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFESYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMQKMPLHN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40407873 40415350 - XM_039027721.1 Bhi03g01899 30676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01899 332 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
Bhi03g01899 332 Gene3D - 63 175 - -
Bhi03g01899 332 SUPERFAMILY Cyclin-like 67 176 IPR036915 -
Bhi03g01899 332 CDD CYCLIN 81 167 IPR013763 -
Bhi03g01899 332 Pfam Cyclin C-terminal domain 179 277 IPR031658 -
Bhi03g01899 332 Gene3D - 177 279 - -
Bhi03g01899 332 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Bhi03g01899 332 Pfam Cyclin, N-terminal domain 67 174 IPR006671 -
Bhi03g01899 332 SMART cyclin_7 87 168 IPR013763 -
Bhi03g01899 332 MobiDBLite consensus disorder prediction 300 332 - -
Bhi03g01899 332 PANTHER CYCLIN-H 1 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01899 Bhi-Chr3:40407873 Bhi10g01768 Bhi-Chr10:44535352 1.11E-13 dispersed
Bhi03g01898 Bhi-Chr3:40407873 Bhi03g01899 Bhi-Chr3:40407873 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01899 K06634 - csv:101220754 613.994