Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01943 GATGTAATAAGAAAGAGGAAGGCAAGGAAGAAGAACAGCGACCCTCTTTTTTGTGTCTGTTTTGTTAGAGAAAAGAGAGAGAGAGATTTTCAGTGAGTTCTTCTTCTTCCTCAATTCTTCCCCTAATTTTATTCTCTCTTTTTCTTTTCTTTTTTTTCTCTCAATACCCAAAACAAAAAAGAAAAAGAAAAAAAAAAAACTCATCTCTATTACAACTTTGTCTCTTTTTCCTCTACACTCTTCCCAATCCAGGTGGAATTATTATTAATATTGTTATGTGGAGTATTTGGATCCGATGAAGAAGAAGAACAATAATTATATAAGAAGAAGAATTATTGTTATTATTATGTGATATGGGACTCGCTAAAGGTCCATTAATTTTGTCCAATAAGGCAACTAGTTGTGCCAATTCTTCTATGTCCCACGATTATCATCATCATCATCATCAAGGAATCTTCACCTTCTCTAATGTCACCTTGGACAAATCCAATTCCTCCGCCATCCCTCAACACAACCGCCCTGATAAGCTCCGTCTCGACTCCTTCTCCGATTCGATTCCTCCACCATCCGTCATTGGAATAGATGAACACCACCACCATCACCAGCACCATCAACAACAACTTCATCATCATGTCTATGCTTCCACACCTAGTGGGGGGACCATGTTATCCGACATGTTCAATTTCCCTCCCACTCCCTCCCCCGGCGCGGCCACCGTTGAATTCTCAGACAATTTTCGAACTTTACACCCTCCCAACTCGGCCTCGGCTTCATCCATGCAACTTTTCTTGATGAACCCTCCTCCACCACCACAACCACAACCACAACCCCGATCCCCTTCGCCAACCTCTACCTCCTCCACTCTCCACATGCTCCTCCCGAATCCACCTGCGAACCCTCTTCAGGGTTTCGAAGGTGGGGTTAGTGTTGGAGATCAAACGGCTTACGGACAATTCGCTGTCGTTGAAAGTCAAGGTCTTTCACTCTCACTTCACTCTTCATCCTTACAACACTTGGAGGACGCTGCTGCTGCCGCCGTCGCCGTCGCAAAAGCGGATGAATTAAGAATTAGGGATGGTGGGATTTTGTATAGTTATAACAACAACAACAATCAAGTCCATGGTGGAGGAGGAGGGGATGGAGGAAGTGGATCAACATCATCAATTTTGCAATATTCTTTTAGAAATAATGAGAATTCTCCTCATAGCTTTCAAGCTAATTCACACATAATGAATCCCAACCATCAAGTTCAAATTGGATTTGGGTCATCTTTAGGAGTTGTAAATGTGTTGAGGAATTCAAAATATGTCAAACCTGCACAAGAATTGCTCGAGGAGTTTTGTAGTGTTGGCAAAGTTCAATTGAAGAAAAACAAGTTCACTATTAAGCTAAACCCCAACACCGAAACTGCCGCCACTGCCACCACCTCCACCGCCGCTCCCGGTGGCTCGACATCAAAGGATCAACCTACCTTATCGGCTGCTGACAGAATTGAGCATCAACGGAGAAAGGTCAAACTATTGTCCATGCTTGATGAGGTCGAACGTAGGTACAACCTATATCGAGAGCAAATGCAAATGGTAGTGAACTCGTTCGACCTAGTGATGGGTTTCGGGGCGGCAGCACCCTACACGACGTTGACACAGAAGGCAATGTCGAGGCACTTTCGATGCTTGAAAGATGCGATAGCGGAGCAGCTAAAGCAGAGCTACGAGGCGTTGGGGGAGAAAGGAGGGAATGGAGGATCAGGAATAACAAAAGGAGAGACACCAAGATTGAAGCTTCTTGAACAAAGCCTTCGGCAACAAAGGGCTTTCCATCAAATGGGGATGATGGAACAAGAAGCTTGGAGGCCACAGCGTGGCCTCCCTGAAAGATCAGTCAACATTCTCAGAGCTTGGCTTTTCGAGCATTTTCTTCACCCGTATCCCAGCGACGCAGACAAGCTTCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTCTCGAATTGGTTCATTAATGCAAGAGTTCGGTTGTGGAAACCAATGGTGGAAGAAATGTACCAACTTGAAGGCAAAGTTGATACAGATCAATCACAAGACGACACCCCACACAACAACAACAATAGTAATAATAAAACCCAAAACAATCCCATAAATGCACAAAATCCAGCACCCACCACCACCGTCGACGAAGTAGCGGCGGACTTCACGGCGGCGCATGAGTACTCAGATCTTCATAATGTGTGGCGACATGGAAGTAGTGAAGATTATGGGACCATGTCTGAGGATGTTACTGCGGCAGCTGACATGAATAATCCTGGACCAACACTTATAAGATTTGGAACCGCAAATACGGCCACCGGTGATGTGTCCCTTACTTTAGGCCTCCGTCACGCCGGAAACACCTCCGCGCCTGCCGCTGCGGTGGATAACCCTTCTTTCTCCATAAGAGACTTTGGTCACTCTTGAGAAGGAAATTTTAAACTTTTTCAGATTATATATGGATAATGATCGTCAACAAATTGAAATTCCCCTTTTAATTTTTGTTTTTATTTTTGGCCCTTTTTCTTTTTTATAGAAAATTAATTGATGTATCATGGTTGAATCTCAATGTACGTATGTAGCTGAATTTGTGTAATTAGGGCTTTGCAATTTGTGGGGTTGATTAAATTATTGTTAATTGTATAGTAGGTTTTTCTTAATTATCTTTTTTTCCCCATTCACTCTCGTTTTCTAGGCTGGTAAGATGTGAGTGTAATAATTTTGTGGAATATGATTATTTGATAATCATTTTCTACGTACGTAAGAAAAAATAAGATATTTATGTGTATTGTTTTGTGTATTA 2832 42.8 MGLAKGPLILSNKATSCANSSMSHDYHHHHHQGIFTFSNVTLDKSNSSAIPQHNRPDKLRLDSFSDSIPPPSVIGIDEHHHHHQHHQQQLHHHVYASTPSGGTMLSDMFNFPPTPSPGAATVEFSDNFRTLHPPNSASASSMQLFLMNPPPPPQPQPQPRSPSPTSTSSTLHMLLPNPPANPLQGFEGGVSVGDQTAYGQFAVVESQGLSLSLHSSSLQHLEDAAAAAVAVAKADELRIRDGGILYSYNNNNNQVHGGGGGDGGSGSTSSILQYSFRNNENSPHSFQANSHIMNPNHQVQIGFGSSLGVVNVLRNSKYVKPAQELLEEFCSVGKVQLKKNKFTIKLNPNTETAATATTSTAAPGGSTSKDQPTLSAADRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAIAEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEGKVDTDQSQDDTPHNNNNSNNKTQNNPINAQNPAPTTTVDEVAADFTAAHEYSDLHNVWRHGSSEDYGTMSEDVTAAADMNNPGPTLIRFGTANTATGDVSLTLGLRHAGNTSAPAAAVDNPSFSIRDFGHS 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41081829 41087632 - XM_039025844.1 Bhi03g01943 30720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01943 700 MobiDBLite consensus disorder prediction 354 373 - -
Bhi03g01943 700 Pfam Homeobox KN domain 516 555 IPR008422 GO:0003677|GO:0006355
Bhi03g01943 700 SMART HOX_1 499 563 IPR001356 GO:0003677
Bhi03g01943 700 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 83 683 - -
Bhi03g01943 700 Coils Coil 386 413 - -
Bhi03g01943 700 MobiDBLite consensus disorder prediction 578 603 - -
Bhi03g01943 700 SMART prehox3 307 447 IPR006563 -
Bhi03g01943 700 Gene3D - 502 564 - -
Bhi03g01943 700 MobiDBLite consensus disorder prediction 571 603 - -
Bhi03g01943 700 SUPERFAMILY Homeodomain-like 500 567 IPR009057 -
Bhi03g01943 700 MobiDBLite consensus disorder prediction 146 162 - -
Bhi03g01943 700 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 83 683 - -
Bhi03g01943 700 CDD homeodomain 499 560 IPR001356 GO:0003677
Bhi03g01943 700 Pfam Associated with HOX 312 446 IPR006563 -
Bhi03g01943 700 ProSiteProfiles 'Homeobox' domain profile. 496 559 IPR001356 GO:0003677
Bhi03g01943 700 MobiDBLite consensus disorder prediction 142 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01943 Bhi-Chr3:41081829 Bhi10g02203 Bhi-Chr10:56344405 3.38E-164 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
752 PF07526 POX 4.00E-48 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01943 - - bhj:120073177 1256.89