Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g01987 ACAAACACCTATGAGAGAGAGGGAGATAAGAAAAGTCCATTATTTAAACAATTTTCAGTTTCAAATTTGTTCTATAAATAGTATCTAAATCAATACCATTCTCTTTGCCTCCCTTTTATTAATTAATTCATTCACTCATTCCAAGAGAATGACCAAAAAGAACTTAGTTCCTTCCTAAATCCAACAAAATTGACAAAGATCAAATCATGAACATGAACAACATAACCTCCATCAAAACTGCCTCCAATGGCGTATGGCAAGGTGATAATCCTCTCCATTTCGCCTTCCCTCTCTTAATCCTTCAATCCGTTCTCATCCTCATCCTCACTCGTTTCCTCGCTCTCCTCCTCAAACCCCTCCGTCAACCCAAAGTCATTGCCGAAATCGTCGGTGGGATTCTACTGGGTCCATCTGCTTTTGGACGTAACAAAACTTACTTGCACCGAATCTTTCCCCAGTGGAGCACTCCCATTCTTGAATCAGTTGCTAGTATTGGTTTGTTGTTTTTCTTGTTTCTCGTTGGACTCGAGCTTGATTTGGCCTCCATCCGTCGTAGCGGTAAACGAGCATTCGGAATTGCCCTGGCGGGAATCTCTGTACCGTTCTTTTCTGGTATCGGTGTTGCCTTCATCCTTCGTAAAACTGTCGACGGTGCTGACAAAGTCGGTTACGGTCAGTTCATTGTATTCATGGGTGTCGCTCTCTCCATCACTGCCTTTCCTGTTTTAGCCCGCATTTTAGCCGAGCTGAAACTCCTCACTACCCAAGTCGGCGAAACAGCAATGGCCGCAGCCGCGTTCAACGACGTTGCAGCTTGGATCCTCCTCGCACTCGCCGTTGCCTTAGCCGGTAACGGCGGTGAAGGCGGATCGGAAAAGAGTCCATTGGTTTCCGTGTGGGTCTTACTTTCCGGAGCCGGGTTCGTGGTTTTCATGATGGTGGTCACTCGACCGGGAATGAAATGGGTGGCGCGGCGGTGCTCGTACGAGCACGACGCCGTGGACGAGGCTTATATCTGTTTGACATTAGTCGGAGTGTTGGTATCGGGATTTGTGACGGATTTGATCGGAATTCATTCGATTTTTGGGGGATTTATATTTGGATTGACGATTCCGAAAGGGGGAAGATTTGCTGAGAGATTGATTGAGAGAATTGAAGATTTCGTTTCAGGTCTTCTTCTTCCTCTGTATTTTGCTTCCAGTGGGTTGAAGACGGATGTGGCGAAGATTAAAGGGGGGAAAGCTTGGGGATTGCTGGCGCTGGTTATATCGACGGCGTGCGCCGGTAAGATTCTGGCGACGTTTGTGGCGGCGATGGTGTTTTTGATACCGGCGAGGGAGGCGCTGGCGTTGGGGCTGCTTATGAACACCAAAGGCTTGGTCGAACTCATTGTGCTCAATATTGGGAAGGAGAAAAAGGTTTTGAACGACGAAGTATTCGCCATATTAGTGTTAATGGCATTATTTACGACATTCATCACCACCCCCACCGTGATGGCGGTTTATAAGCCAGCCCGTGGTGGCTCCACCCCACCTACCCATCGTAAACTCCGCGACCTCTCTGCCGACGACACTATCGACGACGAGCTCCGAATCCTTGCCTGTGTCCACAGCTCCGGCAACGTGCCGTCGCTCATCACCCTGACCGAGTCAACTCGCAGCACCAAAAATTCCTCCCTCAAACTCTTCGTAATGCACCTGGTTGAACTCACCGAGCGATCCTCTTCCATCATGATGGTCCAACGCGCCCGCAAAAACGGCTTCCCTTTCTTCGCCCGGTTCCGTAAGGCCAGCGAGTGGCGGGACCAAATGGCTGCGGCCTTTCAGGCCTACAGCCAATTGGGCCGAGTCAAGGTCCGGCCCACTACGGCCGTCTCTTCCCTAGCCACTATGCATGAGGATATTTGCCACGTGGCGGACGATAAGAGGGTCACTATGATTATCTTGCCGTTTCATCGGAATTGGAGGGCGTTTGGCGGCGGCGATGTGGCGGAGGAGGAAGTGGAGGAGAATGTGGGCCATGGATGGAGAGTTGTGAACCAACGGGTTTTGAAGAATTCGCCTTGCTCTGTGGCGGTTCTTGTGGACCGTGGATTTGGGGCCGCTGCGGCCCAGACGCCTGGGCCTGGGCCCATGGTTGGTGTGGGCCGAAGGATTTGTGTTCTGTTTTTTGGTGGGCCTGATGATCGGGAGGCGCTGGAGTTAGGTGGCCGGATGGCGGAGCATCCGGTGGTGAAGGTAACGGTAGTCAGGTTTCGGCCGTCGTCAGCGGATGGGATGGAGGGTAGTAATGTCATTTTGCGTCCCATGCATTCGAAATCTGGCGATAACCATTATAGCTTCACCACCACTCCAATCAACCGGGAAAAAGAAAAGGAGCTAGATGATGCAGCATTGGCAGAATTCAGAAGCAAATGGGAAGCAACAGTTGAGTACAAAGAGAAGGAGGTGAGCAACATGAACATGATAGTTGAAGGGGTGATGGCCCTCGGAAAGGAATGCGGTTACGACCTAATCGTCGTGGGGAAGGGTCGGGTTCCCTCAAGTATGGTAGCGAAACTAGCGGACCGACCCGTGGAGCATGCCGAGTTGGGGCCAGTAGGGGATTTATTGGCCAGCTCAGGCAAGGGAATCGTATCTTCAATATTGATAATTCAACAACATGGAGGAGGTGCTCATGTAGAAGAAACTCCAGTTTTGAAGATAGCACAATCCAATAAGAATGAGCTGCCTTTGTCAACTGATGGAGCTTCAACTGATCATGTATAAAATCATAGGTATCTTCAACTTTGTTACATAGTTCAATTGGTACATTATAGTTGCTAGTTTATTGTATCAATTCACTCATTTCATAGAAATTATAGCATATTATTATTACAATCCTAGTTGAACATGTAATTTGATGTTTCCCGTACATTAAATGATTATACCATGAAATTCATCAAA 2945 48.9 MNMNNITSIKTASNGVWQGDNPLHFAFPLLILQSVLILILTRFLALLLKPLRQPKVIAEIVGGILLGPSAFGRNKTYLHRIFPQWSTPILESVASIGLLFFLFLVGLELDLASIRRSGKRAFGIALAGISVPFFSGIGVAFILRKTVDGADKVGYGQFIVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGNGGEGGSEKSPLVSVWVLLSGAGFVVFMMVVTRPGMKWVARRCSYEHDAVDEAYICLTLVGVLVSGFVTDLIGIHSIFGGFIFGLTIPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIKGGKAWGLLALVISTACAGKILATFVAAMVFLIPAREALALGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARGGSTPPTHRKLRDLSADDTIDDELRILACVHSSGNVPSLITLTESTRSTKNSSLKLFVMHLVELTERSSSIMMVQRARKNGFPFFARFRKASEWRDQMAAAFQAYSQLGRVKVRPTTAVSSLATMHEDICHVADDKRVTMIILPFHRNWRAFGGGDVAEEEVEENVGHGWRVVNQRVLKNSPCSVAVLVDRGFGAAAAQTPGPGPMVGVGRRICVLFFGGPDDREALELGGRMAEHPVVKVTVVRFRPSSADGMEGSNVILRPMHSKSGDNHYSFTTTPINREKEKELDDAALAEFRSKWEATVEYKEKEVSNMNMIVEGVMALGKECGYDLIVVGKGRVPSSMVAKLADRPVEHAELGPVGDLLASSGKGIVSSILIIQQHGGGAHVEETPVLKIAQSNKNELPLSTDGASTDHV 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 42293270 42299669 - XM_039027406.1 Bhi03g01987 30764

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g01987 853 Pfam Sodium/hydrogen exchanger family 36 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bhi03g01987 853 Gene3D - 29 437 IPR038770 -
Bhi03g01987 853 PANTHER CATION/H + ANTIPORTER 4 834 - -
Bhi03g01987 853 PANTHER BNAC06G14930D PROTEIN 4 834 - -
Bhi03g01987 853 Gene3D - 461 794 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g01987 - - - cmo:103490056 1493.4
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01986 Bhi-Chr3:42293270 Bhi03g01987 Bhi-Chr3:42293270 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g701 . . . . . . . . . . . Cma07g00971 . Car07g00960 . Cpe10g00875 . Bhi03g01987 . . . Hepe04g0870 . . . . . . . . . . Cone10ag0300 . . Lsi01g01409 . . . . . . . . Bpe02g00838 . . . . Cmo07g01023 . . . . . . . . . . . . . . . . . . . . . . . Cme08g02387
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi10g01674 . 11 820 Antiporter Super Family AT2G13620 71.6 0.0e+00 1159.1
Bhi01g02278 . 11 784 Antiporter Super Family AT2G13620 50.4 4.2e-209 725.7
Bhi01g02279 . 11 784 Antiporter Super Family AT2G13620 50.4 4.2e-209 725.7
Bhi03g01987 . 77 847 Antiporter Super Family AT3G53720 69.2 2.3e-289 992.3
Bhi03g01986 . 76 846 Antiporter Super Family AT3G53720 69.2 2.3e-289 992.3
Bhi01g02286 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02287 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02288 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02289 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02285 . 82 769 Antiporter Super Family AT3G53720 50.1 1.4e-182 637.5
Bhi01g02286 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02287 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02288 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02289 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02285 . 5 772 Antiporter Super Family AT5G41610 68.2 5.2e-300 1027.7
Bhi01g02278 . 1 784 Antiporter Super Family AT5G41610 67.4 1.1e-299 1026.5
Bhi01g02279 . 1 784 Antiporter Super Family AT5G41610 67.4 1.1e-299 1026.5
Bhi01g02277 . 54 846 Antiporter Super Family AT5G41610 63.9 1.2e-288 989.9
Bhi03g01987 . 9 821 Antiporter Super Family AT5G41610 50.9 1.1e-206 717.6
Bhi03g01986 . 9 820 Antiporter Super Family AT5G41610 51.0 4.8e-205 712.2
Bhi01g02285 . 12 789 Antiporter Super Family AT4G23700 66.2 4.0e-292 1001.5
Bhi01g02278 . 11 801 Antiporter Super Family AT4G23700 64.0 1.5e-283 973.0
Bhi01g02279 . 11 801 Antiporter Super Family AT4G23700 64.0 1.5e-283 973.0
Bhi01g02277 . 54 841 Antiporter Super Family AT4G23700 62.3 3.8e-282 968.4
Bhi01g02286 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02287 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02288 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02289 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02286 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02287 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02288 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02289 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02278 . 4 782 Antiporter Super Family AT3G17630 62.2 1.2e-269 926.8
Bhi01g02279 . 4 782 Antiporter Super Family AT3G17630 62.2 1.2e-269 926.8
Bhi01g02285 . 5 791 Antiporter Super Family AT3G17630 62.1 6.1e-269 924.5
Bhi01g02277 . 50 825 Antiporter Super Family AT3G17630 61.1 4.5e-264 908.3
Bhi03g01987 . 1 823 Antiporter Super Family AT3G17630 51.0 5.6e-206 715.3
Bhi03g01986 . 1 822 Antiporter Super Family AT3G17630 51.0 3.1e-204 709.5
Bhi01g02278 . 1 784 Antiporter Super Family AT1G64170 57.1 1.0e-239 827.4
Bhi01g02279 . 1 784 Antiporter Super Family AT1G64170 57.1 1.0e-239 827.4
Bhi01g02285 . 2 773 Antiporter Super Family AT1G64170 57.9 4.0e-236 815.5
Bhi01g02286 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02287 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02288 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02289 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02277 . 54 827 Antiporter Super Family AT1G64170 55.7 4.8e-229 792.0
Bhi10g01674 . 11 820 Antiporter Super Family AT2G13620 71.6 0.0e+00 1159.1
Bhi01g02278 . 11 784 Antiporter Super Family AT2G13620 50.4 4.2e-209 725.7
Bhi01g02279 . 11 784 Antiporter Super Family AT2G13620 50.4 4.2e-209 725.7
Bhi01g02278 . 1 784 Antiporter Super Family AT1G64170 57.1 1.0e-239 827.4
Bhi01g02279 . 1 784 Antiporter Super Family AT1G64170 57.1 1.0e-239 827.4
Bhi01g02285 . 2 773 Antiporter Super Family AT1G64170 57.9 4.0e-236 815.5
Bhi01g02286 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02287 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02288 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02289 . 4 784 Antiporter Super Family AT1G64170 56.0 2.3e-231 799.7
Bhi01g02277 . 54 827 Antiporter Super Family AT1G64170 55.7 4.8e-229 792.0
Bhi01g02285 . 12 789 Antiporter Super Family AT4G23700 66.2 4.0e-292 1001.5
Bhi01g02278 . 11 801 Antiporter Super Family AT4G23700 64.0 1.5e-283 973.0
Bhi01g02279 . 11 801 Antiporter Super Family AT4G23700 64.0 1.5e-283 973.0
Bhi01g02277 . 54 841 Antiporter Super Family AT4G23700 62.3 3.8e-282 968.4
Bhi01g02286 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02287 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02288 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02289 . 11 794 Antiporter Super Family AT4G23700 62.5 5.3e-276 948.0
Bhi01g02286 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02287 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02288 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02289 . 1 779 Antiporter Super Family AT5G41610 69.5 1.0e-308 1056.6
Bhi01g02285 . 5 772 Antiporter Super Family AT5G41610 68.2 5.2e-300 1027.7
Bhi01g02278 . 1 784 Antiporter Super Family AT5G41610 67.4 1.1e-299 1026.5
Bhi01g02279 . 1 784 Antiporter Super Family AT5G41610 67.4 1.1e-299 1026.5
Bhi01g02277 . 54 846 Antiporter Super Family AT5G41610 63.9 1.2e-288 989.9
Bhi03g01987 . 9 821 Antiporter Super Family AT5G41610 50.9 1.1e-206 717.6
Bhi03g01986 . 9 820 Antiporter Super Family AT5G41610 51.0 4.8e-205 712.2
Bhi01g02286 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02287 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02288 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02289 . 3 779 Antiporter Super Family AT3G17630 63.2 3.2e-270 928.7
Bhi01g02278 . 4 782 Antiporter Super Family AT3G17630 62.2 1.2e-269 926.8
Bhi01g02279 . 4 782 Antiporter Super Family AT3G17630 62.2 1.2e-269 926.8
Bhi01g02285 . 5 791 Antiporter Super Family AT3G17630 62.1 6.1e-269 924.5
Bhi01g02277 . 50 825 Antiporter Super Family AT3G17630 61.1 4.5e-264 908.3
Bhi03g01987 . 1 823 Antiporter Super Family AT3G17630 51.0 5.6e-206 715.3
Bhi03g01986 . 1 822 Antiporter Super Family AT3G17630 51.0 3.1e-204 709.5
Bhi03g01987 . 77 847 Antiporter Super Family AT3G53720 69.2 2.3e-289 992.3
Bhi03g01986 . 76 846 Antiporter Super Family AT3G53720 69.2 2.3e-289 992.3
Bhi01g02286 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02287 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02288 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02289 . 83 779 Antiporter Super Family AT3G53720 50.9 2.9e-183 639.8
Bhi01g02285 . 82 769 Antiporter Super Family AT3G53720 50.1 1.4e-182 637.5
Bhi09g00657 . 47 790 Antiporter Super Family AT3G52080 53.6 1.0e-231 800.8
Bhi09g00656 . 83 826 Antiporter Super Family AT3G52080 53.6 1.0e-231 800.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004121 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 3 3 1 2 1 2 2 43