Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02053 TGTTTTATTTCTTACAGAAAGTGATAGAGAGAATCCCACGCCTCCAATCCCCAATCACTTCTCAACTTTGCAGCTCCCCTTCTTCCCCTTCTTCAATAATATTTTATATTATATATCATTCTTCCTTCTTCCTTCTTCCTCCTAATAATTATTATAACTACCCCATAAATCAAAATCCCTCCAATTTCTATTCATTTTATTTTATTTTATTCATTTTATTTTATTTTTATTTTTTTTGAGTTTATTGGCTATGGCGGAGGGTTTTGAAATTTACCATGTCCCACAACAAAGCAGGAGAGACAAGCTAAGAGTTGGAATTGGCAGTAGTAGTAGTAGTAATTCAAATCATCATCATCATAATAATTTCTTTCCTTTATATGATGATGATCCCTCTTCTTTTATTTCTTCTGATTTTGATTTTCATCAAAACCCCTCTTTTCAATTACTTCATCATAATTACCCTCCGCCTCCCACCTCCGCCACCACCGTCCTCCACCACCTCCCTCCCCTCCTCTCCGACCAACAACAACCACCCTTATCCCTTGACCTCAACCTCCAACACCGCTACGCCTATCGTTCCACTTCCCTTTTAAAAGCCTCCAAATTTTTCAACCCAGCTCAGCAGCTCCTTCATGACTTATTTGACATCGCTGCCCCTAACTCCTCCGACAAACTGCTCCCGGATTCCGCCCTTCTTGACTCCTTGGACGGTGATATCCCCACCACCGCCGCCTCCGCCCCTGAAAACGGCGACACCACAAAATCTAGGCTTATTACCATTCTCCACGAGGTTTATAGAAGATATAAACTATACTATCAGCAAATGCAAGCAGTGGTTACAACATTTGAGTACGCTGCAGGGCTTGGCAATGCAGCTCCCTATGCAAACTTAGCCATAAAAGCCATGTTTAAGCACTTCAGATTCTTAAAAAATGCCATAGCCGACCAGCTCCAATTCAACAAGCAGCAGCAGCAGCAGCAACCAAACCCTTACTCTCAAAGATCCATTCACAACCACGGTCCCGGATTCCTCAATCATCAACCCGTTTGGCGCCCGCAGAGAGGCCTCCCTGAGAGAGCCGTCACCGTCCTCCGAGCTTGGCTCTTTGAGAACTTCCTTCATCCTTATCCTACGGATACAGATAAGCTCATGTTGGCCAACCAGACTGGACTCTCGAGAAGTCAGGTATCAAACTGGTTCATCAATGCAAGAGTGAGACTCTGGAAACCAATGGTTGAAGAAATCCACATGTTAGAAACAAGGCAAGCTCAAAAATCTCAGCAAAATGAAGGCAACAACAACAATAATATTGAAAATAACAATGCCTTAAACAACAACGATCCTCTTTCCTCCACAAATGAATCCTTACTAAAACCTCACCACAACAATAATGCATCTTCTTCAAACCCCCACCACCCATCTCTAGATTTGTCCAACACCAATTTCTTTCCCACCCACCACCCTCACGCCACCACCGGCAACGTTTCCTTAACTCTCGGCCTCCAACAGAACCACGGCGGCATCGCTCTCACGGAGCCATTTCCCATCAATGCAGCTCACCATTTTAACCTTGGCTTAGAAGCCAACGGTGAAGGGTTTGTAAATGAGTGGTTTTGATTGATGCAAATCAAAATATATGTGGTTTGTTGGCTAAAGATGTTCAATTTTGAACATCATGGGCAGCTAGGGTTGTTTAATTCAGACATTATATATATATACTGACAAATTTTGAGCTACGTTGTAAGAATTAATTCTTATAATCCGAGGTGAAATTGGAGTTAAATCACATTGTTTGTGTTTCTTTGA 1807 42.39 MAEGFEIYHVPQQSRRDKLRVGIGSSSSSNSNHHHHNNFFPLYDDDPSSFISSDFDFHQNPSFQLLHHNYPPPPTSATTVLHHLPPLLSDQQQPPLSLDLNLQHRYAYRSTSLLKASKFFNPAQQLLHDLFDIAAPNSSDKLLPDSALLDSLDGDIPTTAASAPENGDTTKSRLITILHEVYRRYKLYYQQMQAVVTTFEYAAGLGNAAPYANLAIKAMFKHFRFLKNAIADQLQFNKQQQQQQPNPYSQRSIHNHGPGFLNHQPVWRPQRGLPERAVTVLRAWLFENFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKSQQNEGNNNNNIENNNALNNNDPLSSTNESLLKPHHNNNASSSNPHHPSLDLSNTNFFPTHHPHATTGNVSLTLGLQQNHGGIALTEPFPINAAHHFNLGLEANGEGFVNEWF 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44246944 44252164 - XM_039025502.1 Bhi03g02053 30830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02053 455 MobiDBLite consensus disorder prediction 338 406 - -
Bhi03g02053 455 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 30 432 - -
Bhi03g02053 455 Pfam Homeobox KN domain 284 323 IPR008422 GO:0003677|GO:0006355
Bhi03g02053 455 Pfam Associated with HOX 114 231 IPR006563 -
Bhi03g02053 455 MobiDBLite consensus disorder prediction 237 257 - -
Bhi03g02053 455 CDD homeodomain 267 328 IPR001356 GO:0003677
Bhi03g02053 455 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 30 432 - -
Bhi03g02053 455 ProSiteProfiles 'Homeobox' domain profile. 264 327 IPR001356 GO:0003677
Bhi03g02053 455 SMART HOX_1 267 331 IPR001356 GO:0003677
Bhi03g02053 455 Gene3D - 270 332 - -
Bhi03g02053 455 SMART prehox3 108 232 IPR006563 -
Bhi03g02053 455 MobiDBLite consensus disorder prediction 237 266 - -
Bhi03g02053 455 SUPERFAMILY Homeodomain-like 269 334 IPR009057 -
Bhi03g02053 455 MobiDBLite consensus disorder prediction 19 36 - -
Bhi03g02053 455 MobiDBLite consensus disorder prediction 16 36 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g02053 Bhi11g01922 CCT
Bhi03g02053 Bhi11g01922 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02053 Bhi-Chr3:44246944 Bhi08g00196 Bhi-Chr8:7981189 4.57E-66 dispersed
Bhi11g01922 Bhi-Chr11:54758166 Bhi03g02053 Bhi-Chr3:44246944 2.02E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
767 PF07526 POX 1.40E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02053 - - csv:101221147 669.463