Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02093 TCCGTCTGGCAGAGAAACAGTCTTTTCTTTTTCAGAGTAAAAAAAAGCCAATTCTTCATATTCCCAAAAACATCCGCAAAACAAGGAGAGCAGCACAGCAAAGCGACAACTCCCAACACCAAATTCAGTTCATTTTTATTATCAAACTCCTTCTTCACACTACTAAATATGAAATCATCGAGTCCAATTTCACAAAAATTTCCTCTTTTTTCTCCTACCCATCTTCCTTTTCCTCGGATTTGCCTTCTTTATAGCTAAAATTCACAACCCATCTTTGGATTCTCATTTCTTTCTGAGCTTCTGATTGTGGGGTTTCTTAAAAATGGCAGCTTTGGAGACGGCCGGAGCTGATTTGGAAAAAGGGTGGCGGCAGACGGCGGCGGAGAGGGGAAGTGGGGTTGGTGAAGAAGTGAAGGTGAATAATTTGGAGAGGGATTGTAGGATTTGCCATTTGGGTTTAGTGAGCAATAGCAATGAGTTTGGAGTTGGAATCGAATTGGGTTGTTGTTGTAAGAATGATTTGAGTACTGCCCACAAGCATTGTGCTGAGGCTTGGTTCAAAATCAGAGGAAACAAGACATGTGAGATATGTCATTCTATTGTAAGAAATGTGATGGTAGTACGTGAACCCGAACAAACAGAGCAACTCCATGAGTCGAACAATGGGACGGTATCGACAGCCACAGTTGCAGCATCGGTGGCTGCCACTCCCAGTGGTGGCCGGAGCTTTTGGCATGTTCATCGAGTCCTTAATTTTCTTCTTGCTTGTATGGTATTTGCTTTTGTCATATCTTGGCTCTTCCATTTCAATGTGCCATCATAAAATTGAGTGGAAGATTTCAAGAAGAAATATGTTCAGAGTTGCCAGAAATTTGATGATGGATGGGATGGGATGGGTTAAATTGCTTAAATAGTCTACATTTTTTTGGGAGGAAAAAATAAACGTCAAATCTCAAATGAGAGAGTGCATGTCAATTATTTAAA 984 40.85 MAALETAGADLEKGWRQTAAERGSGVGEEVKVNNLERDCRICHLGLVSNSNEFGVGIELGCCCKNDLSTAHKHCAEAWFKIRGNKTCEICHSIVRNVMVVREPEQTEQLHESNNGTVSTATVAASVAATPSGGRSFWHVHRVLNFLLACMVFAFVISWLFHFNVPS 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 45200867 45202290 - XM_039027530.1 Bhi03g02093 30870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02093 166 PANTHER OS01G0850200 PROTEIN 25 166 - -
Bhi03g02093 166 SUPERFAMILY RING/U-box 36 94 - -
Bhi03g02093 166 SMART ringv_2 38 91 IPR011016 GO:0008270
Bhi03g02093 166 Pfam RING-variant domain 39 90 IPR011016 GO:0008270
Bhi03g02093 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 101 IPR013083 -
Bhi03g02093 166 ProSiteProfiles Zinc finger RING-CH-type profile. 31 97 IPR011016 GO:0008270
Bhi03g02093 166 PANTHER ZINC FINGER, RING-CH-TYPE 25 166 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g02093 Bhi11g01900 CCT
Bhi03g02093 Bhi11g01900 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02093 Bhi-Chr3:45200867 Bhi08g00549 Bhi-Chr8:18737601 2.94E-37 dispersed
Bhi11g01900 Bhi-Chr11:54163095 Bhi03g02093 Bhi-Chr3:45200867 8.16E-60 wgd
Bhi03g02093 Bhi-Chr3:45200867 Bhi04g02349 Bhi-Chr4:64503502 1.97E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02093 - - mcha:111019441 222.246