Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02143 GCCATATCTCTCACAGAAAACATCTGAAACCAACAAAACGTTTGCCAAAATTCCCTTGAGTTTCTCTCCCCCTGTTTGGATTCCCGAATACCATATTCCAACCTCGATTAACAAACCATGGCTTCCCAGACAGAGCCTTGGCTAATGGAAAACGGAAGCCTCAAGCGTTTAACCAAAGAACATCGACATGGCCATGGTCGAACAGCTCACAACATGTCGTCCTCTTCCTTACGCAAAAAGTCCGATTTAACTCTTGTCTCCAAAATCCAATTAGGCTGTCTTCGCAAGTTCCTTATCAATCTTCAGGAGGTCATTTTGGGAACTAAACTTTCCATTCTCTTCCCTGCTATTCCGCTCGCTATTGTCGCTCAGAGTTTTGGCTTTGGAAGACCTTGGATTTTTGCATTGAGCTTGCTTGGCCTCACGCCATTGGCTGAACGTGTCAGTTTTCTGACCGAGCAAATCGCTTATTTCACTGGTCCAACAGTTGGGGGGCTTTTGAATGCAACATGTGGAAATGCAACGGAGCTGATAATTGCAATTCTTGCATTGACACAAAGAAAGATAGACGTGGTGAAGTATTCTCTTTTGGGTTCTGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCTCTCTTCTGTGGTGGCATTGCAAATCTTAGAAGGGAACAGAATTATGACAGAAGGCAAGCTGATGTCAACTCCCTGATGCTGATGCTTTCGTTACTGTGCCACCTATTGCCGTTATTGTTTGGCTACGCCGCCTCCTCCACTGCCACGGCCGCCGCCTCCACCCTCCACCTATCCAGAGCCAGCAGCATTGTAATGCTCTCGGCTTACATTGCTTACTTGGTCTTCCAACTCTGGACTCATCGGCAACTATTTGAAGCCGAGGAAGTTGAAGACGACGACGTTCCTGGAGAAGAGGCAGTGATTGGATTCTGGAGTGCATTTGCATGGCTGGTAGGAATGACACTCCTTATTGCTTTGCTGTCCGAATACGTTGTCAACACAATTGAGGAAGCATCTTCTACTTGGGGTTTGTCTGTGAGCTTCCTTAGCATAATCTTACTCCCTATAGTCGGAAATGCGGCCGAACATGCCGGGGCTATCATATTTGCCTTCAAGAATAAGTTGGACATATCTTTGGGGGTTGCTTTGGGATCTGCAACACAAATTGCATTATTTGTGATTCCACTGTGTGTGATAGTTGCTTGGACAATGGGAGTGGACATGGACCTGAATTTCAACCTGATGGAAACAGGGTCACTTGGATTGGCCATTATTGCCACAGCCTTTACTTTACAAGATGGAACCTCTCACTATATCAAAGGCCTTGTTCTTCTTCTTTGCTACATTATCATTGCTGCTTGCTTCTTTGTTTCCAAGACACAAGAAGATGGTAAAAATGCCCCCAACTTGGAACTCCAATCTTCAAACCAAGCAATCTTCAAAGCTTAAAGGTTCAGAAATATTCTCAAATCTTCAATTTCGAAATGAGAGGGACTCTCGTGAAATATCATTTGTGAAGAAGGACCAAAAAAAAAAAAAAAAAAAATCAAATGGGTTTGTTCTTAACTTCTTTGATTTCAAAATTGGCCTCGATCGGTTGCCTGCCTGCTGGAAAGCTTAGAAAATTTGAAGATGTTGGGAGTTTGATGAAGGCAGTTTGTGGGCTAAAAATCAAGCATGCAAAAGTCTGCGGCTTTATATATGCAATATTTGTATGATTTTATTATTATTATTTTATATGCATTATTTAAGTTTTTGTTTTGAATTTTCTTGTTCGTTCCTGCTCTTGTGCGTTAATTGTTGTAATGAAAAATCATGTCCTAATTTCTGCTTT 1846 42.36 MASQTEPWLMENGSLKRLTKEHRHGHGRTAHNMSSSSLRKKSDLTLVSKIQLGCLRKFLINLQEVILGTKLSILFPAIPLAIVAQSFGFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAILALTQRKIDVVKYSLLGSVLSNLLLVLGTSLFCGGIANLRREQNYDRRQADVNSLMLMLSLLCHLLPLLFGYAASSTATAAASTLHLSRASSIVMLSAYIAYLVFQLWTHRQLFEAEEVEDDDVPGEEAVIGFWSAFAWLVGMTLLIALLSEYVVNTIEEASSTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETGSLGLAIIATAFTLQDGTSHYIKGLVLLLCYIIIAACFFVSKTQEDGKNAPNLELQSSNQAIFKA 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 46316948 46323698 - XM_039026586.1 Bhi03g02143 30920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02143 447 Pfam Sodium/calcium exchanger protein 278 419 IPR004837 GO:0016021|GO:0055085
Bhi03g02143 447 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016021|GO:0055085
Bhi03g02143 447 TIGRFAM caca2: calcium/proton exchanger 58 421 - -
Bhi03g02143 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bhi03g02143 447 Gene3D - 122 422 IPR044880 -
Bhi03g02143 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 434 - -
Bhi03g02143 447 TIGRFAM cax: calcium/proton exchanger 76 421 IPR004798 GO:0006816|GO:0015369
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g02143 Bhi11g01839 CCT
Bhi03g02143 Bhi11g01839 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02143 Bhi-Chr3:46316948 Bhi11g01839 Bhi-Chr11:52627887 0 dispersed
Bhi01g02813 Bhi-Chr1:69894519 Bhi03g02143 Bhi-Chr3:46316948 2.22E-101 transposed
Bhi11g01838 Bhi-Chr11:52627884 Bhi03g02143 Bhi-Chr3:46316948 1.11E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02143 K07300 - csv:101213857 790.03