Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02183 CTCTTTGGTTTGCCTATCCCTTTTACTTCCTTTCTCTTCTGAAACTCTAATTCTAAAATCCCAAAGCTACATAAAAGAAAAAAAGAAAAAAGAAAAATCACAGTCCAAAGCGTTGTTTCAATCAATAAGGAGTTTGAAGAAAGCGTATGACGTCTGAGAATTCTAGTGGGGAAAAGACATCAAGAAAGAGGCGAAATGGGTATGTTTCGGTAGTGGACACTTTGAACAAGTGGAAGAAGTTGAACAACCAATTGGAGGATTTGGCAAAAGATGGAGTAGAGGAAATTCGTAGAGTTCCAGCCAAGGGCTCAAAGAAGGGTTGCATGCGAGGGAAAGGAGGTCCTCAGAATTCAGATTGTAATTTTAGAGGCGTTAGACAGAGGACTTGGGGAAAATGGGTAGCTGAAATTAGAGAGCCAATTGCTAGTAATAATACCCGTATGAAGAAGAAAGGCAGTCGTTTATGGCTTGGCACTTTTGCCACTGCTTACCAGGCTGCTCTTGCTTATGATGAAGCTGCTAAAGCCATGTATGGCCCTTTTGCCCGTCTCAATTTTCCTGATTCTTCTCCTCTTCTTCTGAAACCATTAACAGCAGAGCATTCTGATACCATATCCCCAGTTGCTTCTTCCTCCTCGTCTTCTTCCTTCTTCAATGAACTATCTGCGGAGAAAATGAATTGCTGTTATTCAATGGATAAGCAAGAGAATTGTGGCTATGAATCAATGGAGGAACTGAAGGTGAAAGTGGAAGAAACAGCAAGAAGTAGAGTCAATTATACAGATGCTAAACCCAATTCATTTTATGATTCTAACATTGAGAACAAATTAACAGAAGGAAATATCAAGGAAGGATTAGCTGATGTTGTAAGAAGCCATAATATTAATACAGACAGCCATGATCAGAATGACCCTTCTGAGTTTTGTTTCAAATTTGAAGCTATGGACACAAATGGATGCAATGACTTCAACGAATGCAATCAATATGTGCTACAAAAGCTTCAGAGTGATCCATATGCAAGAACTTACTGGATTCCGGCCAAGTGGGAGATTGGCGATCTTGGGTCCGCGACTGTGATGGAAGGAAAGCCAATGGAGATCGAGAGCTATGGAGATTGTATGGCCTTCAACCGTGATCTGAGTTTGTTGCTGGATAGGCAAAAATACATGGGAGTTGGAGACCAGAGAATTGATGATTGTAATAACTTTGAGTTTTTGAGACCTGATTATGATTTTGGATTGGAGGAGGAACGCAAGTGGCTTGATTTATGCTTCCATGGATGAAGATTGAAAGTTTAGGCAGGGTTGTCTTTTGTTTTTTCGTTACAAATTTATTCTATTTTGATCGTACATAGTTAGTTTCATTTCTTCTCCTTTTTGCGGACCCCTGTTCTTTTGTACACCTTCAATAACACATGAGATTTAGAATGATG 1432 39.73 MTSENSSGEKTSRKRRNGYVSVVDTLNKWKKLNNQLEDLAKDGVEEIRRVPAKGSKKGCMRGKGGPQNSDCNFRGVRQRTWGKWVAEIREPIASNNTRMKKKGSRLWLGTFATAYQAALAYDEAAKAMYGPFARLNFPDSSPLLLKPLTAEHSDTISPVASSSSSSSFFNELSAEKMNCCYSMDKQENCGYESMEELKVKVEETARSRVNYTDAKPNSFYDSNIENKLTEGNIKEGLADVVRSHNINTDSHDQNDPSEFCFKFEAMDTNGCNDFNECNQYVLQKLQSDPYARTYWIPAKWEIGDLGSATVMEGKPMEIESYGDCMAFNRDLSLLLDRQKYMGVGDQRIDDCNNFEFLRPDYDFGLEEERKWLDLCFHG 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 47468708 47470257 - XM_039027514.1 Bhi03g02183 30960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02183 378 Pfam AP2 domain 71 130 IPR001471 GO:0003700|GO:0006355
Bhi03g02183 378 SMART rav1_2 72 144 IPR001471 GO:0003700|GO:0006355
Bhi03g02183 378 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 287 - -
Bhi03g02183 378 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Bhi03g02183 378 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Bhi03g02183 378 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 287 - -
Bhi03g02183 378 ProSiteProfiles AP2/ERF domain profile. 72 138 IPR001471 GO:0003700|GO:0006355
Bhi03g02183 378 SUPERFAMILY DNA-binding domain 72 140 IPR016177 GO:0003677
Bhi03g02183 378 Gene3D AP2/ERF domain 72 139 IPR036955 GO:0003700|GO:0006355
Bhi03g02183 378 CDD AP2 71 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02183 Bhi-Chr3:47468708 Bhi04g02287 Bhi-Chr4:62588823 4.46E-32 dispersed
Bhi10g01210 Bhi-Chr10:26540543 Bhi03g02183 Bhi-Chr3:47468708 7.71E-52 transposed
Bhi03g02183 Bhi-Chr3:47468708 Bhi04g02286 Bhi-Chr4:62588823 3.32E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
782 PF00847 AP2 1.10E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02183 - K09286 csv:116403565 640.958