Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02208 CGGGCGACCAAATCGAAGCTTGTATTTGCATTTGCGTTTAGGGTTTGGGTTTCTAAATTTCCCTGAAGCTTCGCGTACATTCTCAATCTGCTTGCTGATTTGCAGCTAATTTCATCATTTTTCCATCAATTTCTTCTCAATTCCTTTTCGGTTTCTCGTTTGATTAAAGGCACCTGGGAATGCTGAAACATGTGTATTCAAGTCGGGGTTTTCTTCTCTGAGGTTGATGATGAGGTTACTCACCCATCGTGGATGCCCTCTTACGTGCTTCATGAAATTGGGTATTTAATTCGTCAACCATACAGATTGGGATGCCAAATGCTCTCTGCATCTTGCAATGCAAGAGAACTTGTATTCAAGCACAGTTATAGTGAAGATGGTTGAGTTTTATGTTTAAATATTAGTTGACTGATTATTTTGTCCAGTGGTAGTCGCTGTTACTATTTTGTCTTAGTGAAGTACATTTGTCATGGAGAACAAAGGAGCTATCTTGATGGAACGTTATGAATTAGGAAGGCTGCTGGGGCAGGGGACCTTTGCCAAGGTTTACTATGCTAGAGACATTAAAACTGGCATGAGTGTGGCTATTAAAGTGATTGACAAAGAGAAGATCTTGAAGGTTGGAATGATTGATCAAATCAAGAGGGAGATCTCTGTTATGAGATTAGTTAAGCACCCCAACGTTGTTGAGCTTTATGAGGTTATGGCAAGTAAAACTAAAATTTACTTCGTCATGGAATATGTCAAAGGCGGTGAACTATTCAATAAGGTATCCAAAGGAAAGCTTAAAGAAGCTGTTGCACGGAAATATTTTTGGCAGCTGATCAGTGCTGTTGATTATTGCCACAGTAGGGGGGTATGCCATCGAGATTTGAAACCAGAAAATTTACTATTGGATGAACATGGTAATCTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGCTGAATCTAAACGGCAAGATGGATTGCTCCATACAACGTGTGGAACACCTGCTTATGTAGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCGTGTGGAGTGATTTTATTCGTTCTATTGGCCGGTTATCTCCCATTCCATGATCCTAATCTTATGGAGATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTTCCCAACTGGTTTGCACCAGAGGTGCGCAAGCTATTGTCAAAGATTTTGGATCCCAACCCAAATACCAGGATATCTATTGCCAAAATCATGGGAAGTTCTTGGTTAAGGAGGGAGTTCAGTGTAAAACCACAGTTTAATGCAGCAGAGGAAGTGAAAGAAGTGGCTCCTTCAGACGTTGATGCAGATTTTGTGTCTACAGCTGAGAACAGAGACTCCATTAGAGAGTCGAAGCAAGAAATGGAAAAGCCATTGAATTTGAATGCTTTTGACATAATCTCCTTGTCATCGGGTTTCGATTTGTCTGGATTGTTCGAGGAGACTGATCTAAAGAAAGAAGTGAGATTCACATCGAACAAGCCTGCTTCCACGATAATCTCAAAACTGCAAGACGTTGCGAAGTGTCTAAAATTGAAAATCAAGAAGAAGGACAGGGGCCTACTGAAGATTGAAGGGTGTAAAGAAGGTCGAAAAGGAGCCGTATGTATCGATGCAGAGATTTTTGAGGTTACCCCATCATTCCATATTGTGGAAATGAAGAAATCAAACGGAGATACTTTGGAATATCGCAAGATAATGAAAGACGATATTAGACCCGCTCTGAAGGACATTGTCTGGACCTGGCAAGGCGAACTGCAACAGAGACAGCCATTACAAGCAGAACAACAAGGACAAGAAGTGCAACAACAATCTTCTAATTCATTATAACACAGGACCGGTGGAGGCATCTTCTTAGAGTATGAGGTACCATATCCTTAGCCTTATCTTTTGTGTTATTAACTTCTCGGAAAAGCTTATAGGAGACCATTTTGTAATAATATGCTTTTTTGTTGATATTATGTCTGAAGGCCTATTGATGTATTTTGTGGCTTCCTTTCTCTCCGGACCCATCTTTTGTGTTAAGTTATTTGCTCCATAGTTTTTAATTGACTTGTAAGTAGGACTGGTAAAATGATCACAATTCACAAGTTAACAATATTGTCATATATGGGTCTTGAATAAGGGTAAAACCATGGGTCCACATCTTAAGCTTTGATGCAAACGTTTGTGTTTGGCTATGAATATTCGATGTTTGACTAAGATATGCCACTTTCATATGGAAA 2262 39.66 MENKGAILMERYELGRLLGQGTFAKVYYARDIKTGMSVAIKVIDKEKILKVGMIDQIKREISVMRLVKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKEAVARKYFWQLISAVDYCHSRGVCHRDLKPENLLLDEHGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDPNLMEMYKKIGKGEFKFPNWFAPEVRKLLSKILDPNPNTRISIAKIMGSSWLRREFSVKPQFNAAEEVKEVAPSDVDADFVSTAENRDSIRESKQEMEKPLNLNAFDIISLSSGFDLSGLFEETDLKKEVRFTSNKPASTIISKLQDVAKCLKLKIKKKDRGLLKIEGCKEGRKGAVCIDAEIFEVTPSFHIVEMKKSNGDTLEYRKIMKDDIRPALKDIVWTWQGELQQRQPLQAEQQGQEVQQQSSNSL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 48212829 48216075 + XM_039026059.1 Bhi03g02208 30985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02208 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02208 465 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02208 465 Gene3D Kinase associated domain 1, KA1 311 437 - -
Bhi03g02208 465 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Bhi03g02208 465 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 449 - -
Bhi03g02208 465 Pfam NAF domain 314 372 IPR004041 GO:0007165
Bhi03g02208 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bhi03g02208 465 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Bhi03g02208 465 PANTHER - 2 449 - -
Bhi03g02208 465 CDD CIPK_C 318 432 - -
Bhi03g02208 465 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Bhi03g02208 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bhi03g02208 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02208 465 CDD STKc_SnRK3 11 265 - -
Bhi03g02208 465 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02208 Bhi-Chr3:48212829 Bhi10g00872 Bhi-Chr10:17765554 0 dispersed
Bhi11g01466 Bhi-Chr11:42460622 Bhi03g02208 Bhi-Chr3:48212829 3.20E-167 dispersed
Bhi12g02255 Bhi-Chr12:72028070 Bhi03g02208 Bhi-Chr3:48212829 1.02E-132 dispersed
Bhi03g02208 Bhi-Chr3:48212829 Bhi03g02212 Bhi-Chr3:48420244 1.60E-137 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87607 PF00069 Pkinase 5.50E-76 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02208 K07198 - csv:101209068 818.535