Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02212 ACCTTCCTTCCCCAACCTGGAGTTGCTGTACCAATTTCCTCTTCACTCTATCTTCCTTCTCTCTCTCCTAAAAACTTCTCGCCTATTTCCATGGCGGACAAGGAGTTCATATAAATTTAAAATTACCCATATCCCTATAATTAAACTTCCTATCCTATTCTATATATTCCAGATTACATACCTTCGTTTTCCGTTGTCATGCCCGCGTTCGAAGACAACCCTCCGCCGGGACTCCCCCGCGGAGACTCCTTGCCGGAGGGAATTCTCTTCGGAAAATACGAACTCGGAAAGCTTCTCGGATGTGGAGCTTTCGCCAAGGTCTATCATGGCAGAAACGTTCTTACAGGACAGAACGTTGCCATCAAAGCCGTTAACAAACTCAAGGTTCTGAAAGGCGGTTTCACGGCGCACGTTAAGAGAGAAATCGCTATCATGCGCCGTCTCCGTCATCCCAACGTCGTTCGTCTCTTTGAAGTTCTTGCGACGAAGACGAAGATTTATTTCGTTATGGAGTTTGCTAAAGGAGGAGAACTCTTCGCGAAAGTTTCTAAAGGAAGATTCAGTGAGAATCTCAGCCGTCGGTACTTTCAGCAATTGATTACCGCCGTAGGTTATTGTCATTCTAAAGGAATTTTTCATCGTGATTTGAAACCGGAGAATCTCCTTCTTGATGATAATTTTGATCTCAGAGTTTCGGATTTTGGACTTAGTGCTCTTACAGATCAGATTCGTCCTGATGGATTACTTCATACGCTTTGTGGAACTCCGGCTTACGTCGCACCGGAGATTCTCGCTAAGAAAGGCTACGATGGCGCTAAAATCGATGTCTGGTCTTGTGGTATAATCCTTTATGTTCTTACTACTGGATATCTTCCTTTCAACGATTCGAATTTAATGGCGATGTATCGGAAGATTTACAGAGGCGATTTCCATTGCCCTAAATGGACGTCTCCAGATCTGCGACGGTTTTTATCGAGGCTTCTTGATACGAATCCTGACACGAGGATTACTGTTGATGAGATTCATCGAGATCCGTGGTTTGTGAAAGGATTTCAGGAGGAGAAATTTCAACAAATTGAAGATTTCTCTTCGGAGCTTTACGGTGATGTGAATAATGCGAAATGTTTGAATGCTTTTGATCTTATTTCTTTCTCACCTGGTTTCGATTTGACTGGATTGATTAATGAGACGGAATTTTCTTCCGGCGTCGAGAGGTTTCTCTCTGCGGAGTCGCCTGAGAAGATTATTGTGACGGTTGAGAACGTAGCAAAGTTGGAGAATGTGGCGGTGGAGAAGAACGGTTGGGGAGCTAAAGTTGAAGGACGTGACGGTGGATTCGTTACTGTGATTGATGTTTTCCGGCTGACGGATGAATTGGTGGTTGTTGAGATTAAAAACAGAGTGAGGGAAATTGATCAAGATCGTCAAACTTGGAAAGATGTATTGAGACCTCAACTTGATTGTTTAATCTACCGGTCAGATTGACGGATTCTGATCGGAAATCGGTGGCCGATTTCTATGATTTGATCGGAAAAATCCGATCCACGAGGAAAATGGAGTCGACTGTGTACGGTTTTTGGAGGAATTTTACCGGGTTTCATGTATAAGTTTCTTTCCCCGGATTTTCTTTTTCTTTTAAAAAAATATTTTATAGAATTACTCTTTTTTATGAAAA 1675 42.69 MPAFEDNPPPGLPRGDSLPEGILFGKYELGKLLGCGAFAKVYHGRNVLTGQNVAIKAVNKLKVLKGGFTAHVKREIAIMRRLRHPNVVRLFEVLATKTKIYFVMEFAKGGELFAKVSKGRFSENLSRRYFQQLITAVGYCHSKGIFHRDLKPENLLLDDNFDLRVSDFGLSALTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTTGYLPFNDSNLMAMYRKIYRGDFHCPKWTSPDLRRFLSRLLDTNPDTRITVDEIHRDPWFVKGFQEEKFQQIEDFSSELYGDVNNAKCLNAFDLISFSPGFDLTGLINETEFSSGVERFLSAESPEKIIVTVENVAKLENVAVEKNGWGAKVEGRDGGFVTVIDVFRLTDELVVVEIKNRVREIDQDRQTWKDVLRPQLDCLIYRSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 48420244 48421918 - XM_039027926.1 Bhi03g02212 30989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02212 428 SUPERFAMILY Protein kinase-like (PK-like) 23 294 IPR011009 -
Bhi03g02212 428 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02212 428 Pfam NAF domain 308 366 IPR004041 GO:0007165
Bhi03g02212 428 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Bhi03g02212 428 SMART serkin_6 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02212 428 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02212 428 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 21 426 - -
Bhi03g02212 428 PANTHER - 21 426 - -
Bhi03g02212 428 Gene3D Transferase(Phosphotransferase) domain 1 21 310 - -
Bhi03g02212 428 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bhi03g02212 428 Gene3D Kinase associated domain 1, KA1 311 426 - -
Bhi03g02212 428 CDD CIPK_C 311 421 - -
Bhi03g02212 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02212 Bhi-Chr3:48420244 Bhi10g00874 Bhi-Chr10:17770878 0 dispersed
Bhi03g02208 Bhi-Chr3:48212829 Bhi03g02212 Bhi-Chr3:48420244 1.60E-137 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87608 PF00069 Pkinase 2.70E-70 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02212 - K12761 csv:116403168 792.727