Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02213 ACAAACGATTGAATTTTTTATAATATTCGCCTTCGCGTCAGCCAACTTGGGAAGGACTTTTCTTAATTCAAAAGACAAATTAAAGTCAAAAACCAACTATCATATTTTTTTATTAAAAAAAAAAAAAAAAACCTCTTAAAACCCCCAATTTTTATTTCTCTTCATTGTTTGGATCACCAAAAGCAAAAAAGAAAAAGAAAAAAAAAAAAAAGAGATTAATTTTCCTTTTCTCTGAGTTTGTTCGTACTCGATTCTGTTCCATCCTCTTCTCCAATGGCGGTTTCTCCCCACTCTTTTCCACCGCGAAAACGCCGGCCGTCCGCCGCCGCCTTCGTCTCCCCCAAACTCTCCGCCCCAATCCTCCTCGAATCTCTCCTCTCCCTCTCCCAAGAAATCTCCACCATGAAACCACTCCAATTCCTCCTCAACCGTTACTCCAATTCCATGATTCGCAAATCCAGATTACTCGAAATCTTCCTCCAAGATCTCCGCCGAAACCAGATCCTTTCCCTCCCCTCAGCCTCCCTCTGCCTCGAAGAAATGTACATCGTTTTACAAAGAATCAAAACATTGATCGAAGATTGTTCTAGCGGAAGCAAGATGTGGTTACTCACTCAAAACGAATCCATCGCCAATCATTTCCACGAACTCACTTTGGATTTGTCGACTCTGCTCGATATCTTCCCTGTCAAAGACGCTGGATTAACCGAAGACGTCGAGGAATTGTTTTACCTCTTGAGAAATCACTGCTCTGAATCCACCGTTTTCCTTGATCCAAGAGATGAAACTCTCAGATTCAGAGTATTGAAGATGATCGATCGAATCAAAGACGAAATCGTTCCGGATTATTCCGAGTTATCAGAGATTTTCTCCATGATTGATATACGCGATTCGTCGAGTTGTAGAGAAGAAATCGAGAATCTCGAGGATGAAATTCAGAATCAAACCGATGAGAAATCGAGATCTGATGTGATTGCTTTGATCGGATTAGTTCGTTATGCGAAATGCGTATTGTATGGAGCGTCGACGGCAGAATATAGTTTCCGGCGGAAAGATTCGATTTCCGATTTGGCTATACCGGCGGATTTCAGGTGTCCGATTAGTTTGGATTTAATGCAAGACCCTGTTGTCGTGGCAACAGGACATACGTACGATCGTGCGGCGATAATGTTGTGGATTGAATCTGGACACAACACGTGTCCGAAGACAGGTCAGACTCTGGCCCACACGAACCTAATTCCGAACCGAGCATTGAAAAATTTGATTGCGATGTGGTGCCGTCAAGAGAGAATTCCGTTTGATGTAACGGAAAGTAATAAAGAGGGAGTCAACGACGTTACGTTAAATAAAGCGGCGTTAGAAGCTATGAGAATGACGGCAACGTTTCTCGTTAACAAACTCGCTACTTCGGTTGACTCTTCCGTGAACGACGTCGTTTACGAGCTTCGTGTTCTGGCTAAAACAGATTCCGGAAGCCGTGGATATATCGCTCAAGCCGGAGCTCTGCCGTTACTCGTCCGATATCTCAACTCCGACAACCCGATTCTCCAAGTTAACGCCGTCACAACGGTTCTCAACCTATCGATTTTTGAAGCGAACAAATCGCTGATAATGGAAACCGACGGCGCGTTGATCGGAGTAATCGAGGTACTCCGGTCTGGCGCTACCTGGGAAGCGAAAGGAAACGCCGCCGCCACCATATTTAGCCTCTCCAGTATCCATTCTTACCGGCGGAGATTGGGGAGGAAGACACGTGTCATAAGGGGATTGCTTGATTTGGCTAAAGACGGGCCGATTAGTTCGAAGAGAGATGCTCTGGTTACCATTTTGACATTAGCCGGCGATAGGGAGACCGTTGGGAGGTTAATCGAAGGTGGGGTTATGGAGACGGTGAGTCACCTGATGAACAGCCTGCCGGAGGAGGCGGTGACGATTTTGGAAGTGGTGGTGAGGAAAGGGGGATTTGTGGCGATTGCTTCGGGATTTTATCTGATTAAGAAATTGGGGGTTGTGTTAAGAGAAGGCTCCGATAGGGCCAGAGAAAGCGCCGCCGCGGCGCTGGTAACAATGTGCCGGCAAGGTGGGTCGGAGATGGTGACGGAGTTGGCTTCGATGGCTGGGATTGAGAGAGTTATTTGGGAATTGATGGGGAGTGGAACGATGAGGGGGCGGCGGAAGGCAGCGTCGCTGTTGAGAATACTCCGGCGATGGGCGGCGGGTTTGGATGCAATTGGTGGCGGCGGAGGAGATTCCATAACGGTTACTTCGTCGAGAATCGGCGGCGATTCAACCACTATTGTTAATTCGTCAAGAGGAGCAGTTGTGCATAGTTAGAAGAGAAGGTTTCATCCTAAATTCTTTACCACATTTGTTTGTAAATTAATATGTTTTTTTTCAAAAAAATTATTTCTTTATTTTTTTCCTGTTTGGAAAAAAAAATGAAAAAGTCCCAAAATAGAGTTTTCATCAGATTGTTTTAATTTGTTTGCACATTGCCACATTCTAGGATGAATCTTTGATAAACAATTAATAGAAAGGTACAAATCATCAAAAATCTTAAGATGATTTCTTATTTGTGTAA 2581 44.6 MAVSPHSFPPRKRRPSAAAFVSPKLSAPILLESLLSLSQEISTMKPLQFLLNRYSNSMIRKSRLLEIFLQDLRRNQILSLPSASLCLEEMYIVLQRIKTLIEDCSSGSKMWLLTQNESIANHFHELTLDLSTLLDIFPVKDAGLTEDVEELFYLLRNHCSESTVFLDPRDETLRFRVLKMIDRIKDEIVPDYSELSEIFSMIDIRDSSSCREEIENLEDEIQNQTDEKSRSDVIALIGLVRYAKCVLYGASTAEYSFRRKDSISDLAIPADFRCPISLDLMQDPVVVATGHTYDRAAIMLWIESGHNTCPKTGQTLAHTNLIPNRALKNLIAMWCRQERIPFDVTESNKEGVNDVTLNKAALEAMRMTATFLVNKLATSVDSSVNDVVYELRVLAKTDSGSRGYIAQAGALPLLVRYLNSDNPILQVNAVTTVLNLSIFEANKSLIMETDGALIGVIEVLRSGATWEAKGNAAATIFSLSSIHSYRRRLGRKTRVIRGLLDLAKDGPISSKRDALVTILTLAGDRETVGRLIEGGVMETVSHLMNSLPEEAVTILEVVVRKGGFVAIASGFYLIKKLGVVLREGSDRARESAAAALVTMCRQGGSEMVTELASMAGIERVIWELMGSGTMRGRRKAASLLRILRRWAAGLDAIGGGGGDSITVTSSRIGGDSTTIVNSSRGAVVHS 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 48472114 48474694 + XM_039027348.1 Bhi03g02213 30990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02213 686 Gene3D - 366 644 IPR011989 -
Bhi03g02213 686 SUPERFAMILY RING/U-box 259 340 - -
Bhi03g02213 686 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 346 IPR013083 -
Bhi03g02213 686 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Bhi03g02213 686 SUPERFAMILY ARM repeat 371 643 IPR016024 -
Bhi03g02213 686 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 409 451 IPR000225 GO:0005515
Bhi03g02213 686 Pfam Armadillo/beta-catenin-like repeat 400 437 IPR000225 GO:0005515
Bhi03g02213 686 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
Bhi03g02213 686 Gene3D - 53 139 IPR036537 GO:0007166
Bhi03g02213 686 PANTHER U BOX DOMAIN-CONTAINING 11 658 - -
Bhi03g02213 686 CDD RING-Ubox_PUB 272 314 IPR045210 -
Bhi03g02213 686 Pfam U-box domain 268 339 IPR003613 GO:0004842|GO:0016567
Bhi03g02213 686 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 11 658 - -
Bhi03g02213 686 Coils Coil 207 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02213 Bhi-Chr3:48472114 Bhi08g02151 Bhi-Chr8:61636478 6.70E-135 dispersed
Bhi03g02213 Bhi-Chr3:48472114 Bhi08g00619 Bhi-Chr8:20447784 4.22E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02213 - - csv:101205143 1197.96