Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02255 AAGAAAAATTTCCACTCTTTTGATTTTTCTAGCTTGTATTCCACGTATGATTGGCAACAACAAATTGATTGTAATAGAAATAAAGGTATCGAATTCAAGCCTGTTTGAAAATTGCGATCGGATATTGATAATGGAGAGCTGACCTCCTTTCTCCCTTTACCCTTTGTTTTTCCCCTTTCTCTCTTGTTCGCTCTCTTCCTCTTCTTCCTTCGAGCTTCATAGGGCTCAAATTTCCGCCATTTTTGTATATTATCATCACCATCGAAACCCCATTAAAACATTTTTTCCATATTCTTTCATCTTCTTTTTTACTGCCACCATTTTCATCCATTTATTCAATCAAACCCTCCCCCTCTTCACTCCTTTTCGTGATTCGCCGGTTTCTTTGACCTTTTTTTAATCCGATGATCGTGCCCCACTTGCTTGATTTCTGATTCAGTGTTGTTATCGTGTTCTTGTTGTTGCTAGAAGTACTGTAGATCGAATTTTCTTATCTGGGTTGTTGCCATGTCGTGATTTTTCTTTATCTGAGGTTCTCCACGGAGTCTCGTTTGCGGAGAAGGGTTAGGCCATTCACCCGAATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTAGTTCAAGGAGGTTTGGAATGTTAGCTGCCTCGAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTACTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCCGAGGCATTGATAAGTGCACGATTACCTTCGGGGTTTCGAGACCATCTTCGCAGCCAGATCGAAGAATCTTCGGGTGCTACTAATGATGGAGAGGTTTCAATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGAAGGTAGCGGTCAGAATACGGTGTCTTTGCAATCTGTTTCGGGGTTGGCATCTGTGACCTTGGCGTCGGAGCTTAGCCAGGGTGAGTCTGCTACTGAACGTGGTGCAAGAGAGGGCATTCCTCAATCAATAAATGCAAGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAAAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCTTTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACTATATGGATTGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATCTCCGTTTTGGTTGGCATTTCTCTTGCATTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGCTTCCTCCCAGAGCGATTCCTCCCTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGCAGAGGCCGCAACTATCGTAAGCAGGGTCAAATGCTAACTTTAGTCGAATATTTGCTGCTACTGTATCGTGCCTTATTGCCTACTCCTGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGCGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTCTCAGAGTGGTTCGAGCGGGAACGAACATGTCCATTGTGTAGGGCTTTGGTTAAACCCGCGGATCTCAGATCATTTGGTGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAAGCCATTTTCTCCAAGCCCCTCAGAGACATTGTGGTTTGAAGAGCTGAAGCCAGCCATTGCATTTTTACCTACACAAATTGTAAATCTAACTAATACTGTGTAGCTGCTACCCTGGAGGAAGCAAAAGACTGGCGCTTGTGAACTCGGAAAGGCGAATTCGAAATCGACATGTATACATAATAGTCCTTTTTATGCTAAAGCGGAGGATGGTGGATGTTCGAGAGGAGGGGTTTAACCCTTGTATGCAAATATTATGAATTATGAGTTTGGGGTGTAAATTTAATATACCAAAGCCAGTTGCTATGTTGATTTATAATTTTAGTCCAAAATGCATTATAAAATGAGAATGTTTTGGACTTCTAGAAATTGTTATATACACAAACAGAATGTGAAACACGTTTTTGGCTATTCAGTTTGTGCCTTGTGGATTTGAAAATGAAGGAAATGAATATGATGAATTTTTA 2458 42.39 MEGSGSDPDSHRAASTSSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALISARLPSGFRDHLRSQIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREGSGQNTVSLQSVSGLASVTLASELSQGESATERGAREGIPQSINASADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49433025 49441552 + XM_039025848.1 Bhi03g02255 31032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02255 470 ProSitePatterns Zinc finger RING-type signature. 424 433 IPR017907 -
Bhi03g02255 470 Pfam Zinc finger, C3HC4 type (RING finger) 407 450 - -
Bhi03g02255 470 CDD RING-HC_RNFT1_like 408 447 - -
Bhi03g02255 470 MobiDBLite consensus disorder prediction 138 174 - -
Bhi03g02255 470 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 470 - -
Bhi03g02255 470 SMART ring_2 409 446 IPR001841 -
Bhi03g02255 470 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 1 470 IPR044235 GO:0061630|GO:1904294
Bhi03g02255 470 SUPERFAMILY RING/U-box 404 452 - -
Bhi03g02255 470 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 384 457 IPR013083 -
Bhi03g02255 470 ProSiteProfiles Zinc finger RING-type profile. 409 447 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02255 Bhi-Chr3:49433025 Bhi07g00437 Bhi-Chr7:19367817 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02255 - K22379 csv:101205267 867.84