Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g02299 | CCCAAATCTCACAACCCCTGAGAAAATCACTCACAAAAACTTCCTTTTTCTCTCTCAAACTCAACAAAATCTGAAACTTTCCTTCTTTTTTTTTTTCTTTTTTTTTCCAAATTTCTTCCCAATTAAAAAGGGAAAAAAAATGAACGACTTGATGACCAAATCGTTCACCAGCTATGTGGATCTGAAGAAGGCAGCCATGAAGGATCTCGACCTTGAATCCGGTTTAGAAATGCCATCGTCCATCACCAACGACAACGGCGACATGGGTCTCTTTCTGGAAGAGGCTGAGAAGGTGAAAACGGAAATGGGTTCAATTAGAGAGATTTTAGTTAAACTCCAACAAGCTAACGAAGAGACCAAATCTGCTCACAAACCCGAAATCCTCAAATCGCTTCGTAATACGATCAATGCCGACATCATCACCGTCCTGAAAAAGGCCCGATCGATCCGATCCCAGCTCGAGGAAATGGACCGCGCAAATGCTGCCAAGAAACGTCTCTCCGGCAGCAAAGAGGGCACTGCAATTTACCGGACGAGAATTGCGGTGACGAACGGGCTGAGGAAGAAGCTAAAGGAATTGATGATGGAGTTTCAGAGTTTGAGGCAGAGGATGATGACGGAGTACAAGGAAACGGTGGGGAGACGGTACTTCACGGTGACCGGGGAGCATCCGGAGGAGGAAGTGATCGAGAAGATAATATCAAATGGTGGGGAGGAGTTTTTGGGGAAGGCGATAAAGGAGCACGGGCGGGGGAAGGTGGCGGAGACAGTGGTGGAGATACAGGACCGGCACGGGGCGGCGAAGGAGATAGAGAAGAGCTTGTTAGAGCTACACCAAGTGTTTTTGGATATGGCAGTGATGGTTGAAGCACAAGGGGAAAAAATGGATGATATTGAACATCATGTGATGAATGCTTCACAATATGTTAGGGATGGGACTAAGGATTTGAAGACAGCAAAAGATTTGCAAAGGAATAGTAGAAAGTATATGTGTGTTGGGATTTTGCTTTTGCTTCTCATTATTTTGGTTGTTGTTATTCCTATTGCTGTTAGTTTTGGAAGTTCTTGAAATCTTATGGTGTTTTTTTAATAGGATTTTATGAGATGGGGATGTGTTCTTGGCATCCCCAATTATAATATGTGTGTGTGTATTAAGAGAATGTGGGGAATTGTAATGCAAATTCTATTCATTTCTTTTTCA | 1201 | 43.38 | MNDLMTKSFTSYVDLKKAAMKDLDLESGLEMPSSITNDNGDMGLFLEEAEKVKTEMGSIREILVKLQQANEETKSAHKPEILKSLRNTINADIITVLKKARSIRSQLEEMDRANAAKKRLSGSKEGTAIYRTRIAVTNGLRKKLKELMMEFQSLRQRMMTEYKETVGRRYFTVTGEHPEEEVIEKIISNGGEEFLGKAIKEHGRGKVAETVVEIQDRHGAAKEIEKSLLELHQVFLDMAVMVEAQGEKMDDIEHHVMNASQYVRDGTKDLKTAKDLQRNSRKYMCVGILLLLLIILVVVIPIAVSFGSS | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 50565201 | 50566479 | + | XM_039025507.1 | Bhi03g02299 | 31076 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g02299 | 309 | Gene3D | - | 42 | 169 | - | - | |
| Bhi03g02299 | 309 | SMART | tSNARE_6 | 206 | 273 | IPR000727 | - | |
| Bhi03g02299 | 309 | CDD | SNARE_syntaxin1-like | 210 | 272 | - | - | |
| Bhi03g02299 | 309 | Pfam | Syntaxin | 45 | 246 | IPR006011 | GO:0016020 | |
| Bhi03g02299 | 309 | SMART | SynN_4 | 37 | 163 | IPR006011 | GO:0016020 | |
| Bhi03g02299 | 309 | ProSitePatterns | Syntaxin / epimorphin family signature. | 217 | 257 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
| Bhi03g02299 | 309 | SUPERFAMILY | t-snare proteins | 41 | 266 | IPR010989 | GO:0016020|GO:0016192 | |
| Bhi03g02299 | 309 | Gene3D | - | 206 | 307 | - | - | |
| Bhi03g02299 | 309 | CDD | SynN | 42 | 198 | IPR006011 | GO:0016020 | |
| Bhi03g02299 | 309 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 211 | 273 | IPR000727 | - | |
| Bhi03g02299 | 309 | PANTHER | SYNTAXIN | 4 | 302 | IPR045242 | - | |
| Bhi03g02299 | 309 | PANTHER | SYNTAXIN-RELATED PROTEIN KNOLLE | 4 | 302 | - | - | |
| Bhi03g02299 | 309 | Pfam | SNARE domain | 248 | 299 | IPR000727 | - | |
| Bhi03g02299 | 309 | Coils | Coil | 137 | 157 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bhi03g02299 | Bhi11g01551 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g01314 | Bhi-Chr3:27049194 | Bhi03g02299 | Bhi-Chr3:50565201 | 7.32E-74 | dispersed | |
| Bhi03g01315 | Bhi-Chr3:27049194 | Bhi03g02299 | Bhi-Chr3:50565201 | 7.32E-74 | dispersed | |
| Bhi03g02299 | Bhi-Chr3:50565201 | Bhi08g01910 | Bhi-Chr8:54935454 | 2.98E-93 | dispersed | |
| Bhi03g02299 | Bhi-Chr3:50565201 | Bhi03g01774 | Bhi-Chr3:37337842 | 4.12E-86 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g02299 | K08486 | - | csv:101220775 | 547.354 |