Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02358 ATGTTTTGCAAGCACCTCCAAGTTTTTCTAAGAGAAACCATATGTGGAGGCTTTGCTTGGGGATTTCATGAAGGAGTTAAGAAGCAGAACCAATTTATTGGAGAGCACATAAGGAATCTGACGGAAACTAGACATAGGAGAGGTACAACCGACGACGATATCATTGCAGTTAGCAGATCGTTCCCTCACTTATCCCGTGGTGTAGTAGAGGATGTTCTTGTTAAAGTCGGTGATTTCATCTTCCCAGTAGATTTTGTGGTCTTAGATATGGAAGAAGACTTTGAAATTCCCATCATCCTTGGAAGGCCATTCCTAGCCATAGGCAGAGCATTGATTGATGTATATGATGGCAAGGTTACACTTTGGGTGAATGATGAGGAGATGAAGTTCAACATTTTTGTTCTTTCAAGCCTGAGGATGTGTGAACACTTTCTTTTTCCCGCCATTTCAAGCCTTTGCTCTCTCTTTCAATCACACTTCTTTCTCTTTGTCCATACCCTCAAATTTCCATCACAGAATCTTAAGAAATTGGTTACCGAACAGGACTGTCCTCATTTGCTCTTCTATGGCCCCTCCGGTTCCGGAAAGAAAACCCTAGTCATGGCCCTCATCTGGCAGATGTTCGGAGCCAGTGCGGAGGAAGTGAAGGTGGAGAACAAAACGTGGAAAGTTGATGCTGAAACTAGAACTATCGATATAGAGTTGACCACCTTATCAAGTACAAACCACGTGGAGCTCACTCCCAGCGATGCAGGTTTCCAAGATAGATATATTATTCAAGAGATTATCAAAGAAATAGCAAAAAACAGACAAATTGACTCCAAAGGGAAAAAGGGGCATAAAGTTTTGGTTCTAAATGACATTGACAAACTATCAAGGGAAGCCCAACACTCTCATAGGAGAACAATGGAGAAATATAGCTCATATTGTAGGTTAATTCTTTGCTGCAATAGTTCATCAAAAGTTACTGAAGCAATCCGTTCTCGCTGCCTAAATGTGCGGATAAATGGACCAACAGAGGAGCAGATTCTCAAGGTACTGGAGTTCATTGGGAAGAAAGAAAGACTGCAACTTCCATCTAGATTTGCTTCCCGTATTGTAGACAAATCAAACCGGAGTTTGAGGAGAGCTATACTATCATTTGAGACTTGTCGTGTTCAACAGTATCCTTTTGTCAGTAACCAGGCAATACCACCAATGGATTGGGAGGAGTACATCATTGAGATAGCATCTGACATATTGAAGGAGCAGAGTCCCAAGAGATTGTTCCAGGTTCGCGGGAATTTATACGAGCTACTGGTTAATTGTATCCCACCGGAGATTATATTGAAGAGGCTGCTTTATGAGCTACTCGAGAAATTGGATGCTGAACTAAAGCATGAGATCTGTCATTGGGCCGCATATTATGAACACAGGATGCACCTTGGACAGAAAGCCATCTTCCACATTGAAGCTTTTGTGGCAAAGTTCATGAGCATATACAAGACTTTCCTCATTTCAACATTCGGCTAAAGAGAAGAAAAGTAGACCTTGAAGTTAGGCTGTTTCAGTTCATTCAAGAAAACCAATTGTAAGTTAATAGATTTGGTGCGACGTTGAATCAAGTCAATCTGGTGTATTTATCATATCTTCTTCGATCAGTTTTGTATGGCACTCTAGTT 1661 41.24 MFCKHLQVFLRETICGGFAWGFHEGVKKQNQFIGEHIRNLTETRHRRGTTDDDIIAVSRSFPHLSRGVVEDVLVKVGDFIFPVDFVVLDMEEDFEIPIILGRPFLAIGRALIDVYDGKVTLWVNDEEMKFNIFVLSSLRMCEHFLFPAISSLCSLFQSHFFLFVHTLKFPSQNLKKLVTEQDCPHLLFYGPSGSGKKTLVMALIWQMFGASAEEVKVENKTWKVDAETRTIDIELTTLSSTNHVELTPSDAGFQDRYIIQEIIKEIAKNRQIDSKGKKGHKVLVLNDIDKLSREAQHSHRRTMEKYSSYCRLILCCNSSSKVTEAIRSRCLNVRINGPTEEQILKVLEFIGKKERLQLPSRFASRIVDKSNRSLRRAILSFETCRVQQYPFVSNQAIPPMDWEEYIIEIASDILKEQSPKRLFQVRGNLYELLVNCIPPEIILKRLLYELLEKLDAELKHEICHWAAYYEHRMHLGQKAIFHIEAFVAKFMSIYKTFLISTFG 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 51519906 51532970 + XM_039026421.1 Bhi03g02358 31135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02358 503 CDD AAA 184 330 - -
Bhi03g02358 503 SUPERFAMILY post-AAA+ oligomerization domain-like 400 495 IPR008921 GO:0003677|GO:0006260
Bhi03g02358 503 Pfam DNA polymerase III, delta subunit 172 336 - -
Bhi03g02358 503 PANTHER REPLICATION FACTOR C SUBUNIT 3 171 495 - -
Bhi03g02358 503 Gene3D Acid Proteases 39 132 IPR021109 -
Bhi03g02358 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 386 IPR027417 -
Bhi03g02358 503 SMART AAA_5 182 341 IPR003593 -
Bhi03g02358 503 Gene3D - 164 338 IPR027417 -
Bhi03g02358 503 Gene3D - 401 494 - -
Bhi03g02358 503 Gene3D - 339 397 - -
Bhi03g02358 503 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 171 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01318 Bhi-Chr3:27116510 Bhi03g02358 Bhi-Chr3:51519906 1.17E-64 dispersed
Bhi03g01319 Bhi-Chr3:27116510 Bhi03g02358 Bhi-Chr3:51519906 1.17E-64 dispersed
Bhi03g02358 Bhi-Chr3:51519906 Bhi12g01589 Bhi-Chr12:51651044 9.18E-35 dispersed
Bhi11g00361 Bhi-Chr11:8642357 Bhi03g02358 Bhi-Chr3:51519906 1.27E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02358 K10756 - csv:101221072 591.267