Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02399 ATAAAAATCATCTTTCAATTCATTCACTCTTCCTCTCCGTTTCTCGTGACTCTCTCTCTCTTTCTCTTTCTCTTTCAGACCCACAAATCTATTTTTCCCACCAAAAAAACCCTTCAGAAAAAGAAACCCCTTTTTCCATTTCTCTCTTCTAATCTCATTTTCCTTCTTCTTTTTCTTCTTCCTTTTCATCAATTTCATCTGGGTATCGATGTTTCCTCCATTGCTCCTTCAGGTTTTCTTGTAATGCTTCTATTTCTTGTTTTTGTTGTTTGTTTGCCTTTTTGGGTTTTGGCTCTTCTTCCTTCGTTTCTTTGAGTTTTTGGGTTTGTTTTTGCCTTTTCTGACATTTTTGGGGTTTCTGTGTTTTCTTGTCTGGAATGTTCTTGGGATTACTCTGTTTTCATAGATTGGTTTGTTGTTGGGCTTTAACTTTATTTTATTTTATTTTTATTTTTTTCCCTTTTTCTGTGGGATTGAAATGAAATGAAGCTTCCCTTTGATGGGTTTTGTTAGAAATTCTCTGTTTGCTGAAGTGGTTAATGTGGTGGGAAAGTTGATTTTTGCTTTCGTTTGCTTTTGGTCTATAATGGGTTTTTGCCATGCAATGTGTTTCTCATAGAGGAAGAGAAAAAGGAAGAGGAAGATCTGGTTTGGCAGCTTCAAAATCAAAAGGGGTTTTTGTTGGAACATTTTAATCTTTATGGCTTTTTTGTGTTGTCATTTCTCCATTTTTCTTGTTGTTGGGCTTCTTTCAAATTCCCAGTTTTTGAGAGCTGAGCTTGATGATCAAATCACCATGTCCACCATTAAAGAGGAGCTTCAAGTTCCTGGGTGGAGCTCAAATATCTCTGAGTACTGCTCTTGGAAAGGTGTTCATTGTGGTTTGAATCACTCCATGGTTGAAACTCTTGATCTTTCTGGTCATTCTCTTAGAGGTAATTTAACTCTGATTTCTCAGCTCAAAGCTCTGAAATGGCTTGACATATCCTACAATGACTTCCATGGCGAGATTCTGTCGAGTTTTGCAAGCTTACCAGAGCTCGAATTCCTTGATTTGTCTGTGAATAAGTTTGATGGTTCGATCCCGCCTCAGTTTGGTGGTCTCAAGAACCTGAAATCATTGAACCTCTCCAATAATCTGTTGGTGGGAGAAATTCCAGATGAGCTTCAAGGCTTAGAGAAGTTGCAAGATTTTCAAATTTCTAGCAACAGGTTGAGTGGTTCAATTCCAAACTGGGTTGGAAATTTGAGTCATCTAAGAGTTTTTACAGCCTATGAGAATGACTTTGGTGGTGTAATTCCTGACAATCTTGGTTCAGTTTCTGAACTTCAAGTGTTGAATCTGCATACCAACAGGCTTGAAGGCTCAATTCCTCGAAGCATTTTTGCTTCAGGGAAGCTTGAGATTTTGGTTCTTACACAAAACAGATTGACTGGCAATCTTCCTAAAGAGATTGGGAACTGCAAAAGGCTTACTAGCGTCCGAGTCGGGAACAATAATCTTGTTGGTGTGATTCCTCCAGCCATTGGAAATGTTACTAGCCTTGCTTACTTTGAAGTGGATAACAATCACCTTTCGGGTGATATAGCATCTCAGTTTTCACGGTGCTCTAACCTTACTCTGCTGAATCTAGCCTCGAACGGGTTCACTGGGGTGATTCCTCCTGAACTAGGAGAGCTAATGAATCTGCAGGAGCTTATTCTTTCTGGTAATAGCCTGTATGGTGACATTCCAAGATCGATGCTCAGTTGCAAGAATCTCAACAAGCTTGATTTAAGCAGCAATAGATTTAATGGTACTATTCCTTCAGATATCTGCAATATATCAAGATTGCAATACTTGCTTTTGGAACAGAATTCAATAAAAGGAGAGATACCTAATGACATTGGAAAATGTACAAAGCTTCTTGACCTGCGACTCGGTAGTAACTATCTGACTGGAAGCATCCCTTCCGAGATTGGTCGTATTAAGAACTTACAGATAGCTTTGAACTTGAGCTTCAACCATCTAAATGGACCAGTGCCTCCTGAGTTGGGGAAACTTGATAAACTGGTTTCGTTAGATTTATCGAACAATCATCTTTCGGGCGATATCCCTTCTGAGCTCAAGGGCATGTTAAGCTTGATCGAGGTGAATTTTTCAAATAATCTGTTTACTGGTTCTATTCCATTTTTTGTTCCATTCCAGAAAAGTGCAAATTCCAGTTTTCTGGGGAACGAAGGCCTTTGCGGGGCACCACTAAGCATTTTGTGTAAGAATTCGATTGGTATCAATCAAGATTACCATCACAAGGTTTCATACAAGATCATACTGGCTGTCATTGGTTCTGGGCTGGCAGTTTTTGTATCGGTTACTATAGTTGTCTTACTTTTTGTGATGAAAGAAAAGCAGGAAAAAGCAGCAAAATCTTCTGGGACTGCAGATGATGAAAAGATCAATGATCAACCACCGATAATAGCAGGAAATGTCTTCGACAACAATCTTCGACAGGAAATAGATCTCGATGTAGTTGTGAAAGCAACTTTGAAGGATTCAAACAAGCTCATCTTTGGCACTTTTAGTAGTGTTTATAAGGCGGTTATGCCTTCGGGTATGATCGTATCAGTTAAGAGACTAAAATCCATGGATAAGACAATCATTCATCATCAAAGCAAGATGATTAGAGAACTTGAAAGGCTTGGCAAACTGAACCATGCTAATCTTTTGCAACTCATTGGATATGTAATATATGAAGATGTGGCTCTGTTGCTTCATAATTACTTACCCAATGGGACATTGGCTCAGCTTCTTCATGAATCCACAAAACAACCTGAATATGAACCTGATTGGCCCACAAGATTTTCCATTGCCATTGGAGCAGCAGAAGGGCTTGCTTTCCTTCATCATTTGGCCATAATCCATCTTGATATTTCATCATCTAATGTTCTTTTAGATGCCAACTTCAAACCTTTGGTTGGAGAAGTTGAGATCTCAAAACTTTTAGATCCATCAAGAGGAACTGCAAGTATTAGTGCAGTTGCAGGTTCATTTGGCTACATTCCACCAGAATATGCATACACAATGCAAGTTACGGCCCCAGGAAACGTTTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGGAATTTGGTGAAGGAGTAGATTTGGTGAAGTGGGTGCATAGTGCTCCTTCGAGGGGTGAAACTCCTGAACAGATACTCGATTCCCGGCTGAGCACGGTGTCGTTTGGCTGGAGGAAGGAGATGCTTGCAGCACTTAAGATTGCATTGCTTTGTACTGATAGCATACCAGCCAAGAGGCCAAAAATGAAGAAGGTGGTGGAAATGCTTATGGAGATCAAGCAAAATTGATGGGCTCCTGACTTTCCCGAGTTTTTGATGTTGTGAATTTTTTCGAGGAACGCCATGCTTGATGCGAGATAAATGATTCGGAATGGAGGTTGAATTCGAGTACTTCAAACTAATGCAATTGTTTTAATGAAGGCGGGAATGAGTGTCCATACATAATTGTATAGTCTGGTTGTTGTTTTCTGATCATCAACCAACCGGATTTGTGACAAAAGAAAGTATATTACATAATGGTTGATGTGTAATCTCTTCTTTGAGTTGAATACAGATAGTTGTGAGTTGCTCTAATGAGATTGAGAGACTTGTGCAATGAAGTAAAGTTGAAAAGGAAGGCACAACA 3710 39.51 MAFLCCHFSIFLVVGLLSNSQFLRAELDDQITMSTIKEELQVPGWSSNISEYCSWKGVHCGLNHSMVETLDLSGHSLRGNLTLISQLKALKWLDISYNDFHGEILSSFASLPELEFLDLSVNKFDGSIPPQFGGLKNLKSLNLSNNLLVGEIPDELQGLEKLQDFQISSNRLSGSIPNWVGNLSHLRVFTAYENDFGGVIPDNLGSVSELQVLNLHTNRLEGSIPRSIFASGKLEILVLTQNRLTGNLPKEIGNCKRLTSVRVGNNNLVGVIPPAIGNVTSLAYFEVDNNHLSGDIASQFSRCSNLTLLNLASNGFTGVIPPELGELMNLQELILSGNSLYGDIPRSMLSCKNLNKLDLSSNRFNGTIPSDICNISRLQYLLLEQNSIKGEIPNDIGKCTKLLDLRLGSNYLTGSIPSEIGRIKNLQIALNLSFNHLNGPVPPELGKLDKLVSLDLSNNHLSGDIPSELKGMLSLIEVNFSNNLFTGSIPFFVPFQKSANSSFLGNEGLCGAPLSILCKNSIGINQDYHHKVSYKIILAVIGSGLAVFVSVTIVVLLFVMKEKQEKAAKSSGTADDEKINDQPPIIAGNVFDNNLRQEIDLDVVVKATLKDSNKLIFGTFSSVYKAVMPSGMIVSVKRLKSMDKTIIHHQSKMIRELERLGKLNHANLLQLIGYVIYEDVALLLHNYLPNGTLAQLLHESTKQPEYEPDWPTRFSIAIGAAEGLAFLHHLAIIHLDISSSNVLLDANFKPLVGEVEISKLLDPSRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEEFGEGVDLVKWVHSAPSRGETPEQILDSRLSTVSFGWRKEMLAALKIALLCTDSIPAKRPKMKKVVEMLMEIKQN 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 53676128 53679929 - XM_039027022.1 Bhi03g02399 31176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02399 890 SMART LRR_typ_2 375 399 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 207 231 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 111 134 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 448 471 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 159 183 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 135 158 IPR003591 -
Bhi03g02399 890 SMART LRR_typ_2 327 351 IPR003591 -
Bhi03g02399 890 Gene3D Ribonuclease Inhibitor 176 274 IPR032675 -
Bhi03g02399 890 CDD STKc_IRAK 618 887 - -
Bhi03g02399 890 ProSiteProfiles Protein kinase domain profile. 609 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02399 890 Pfam Leucine rich repeat 131 172 IPR001611 GO:0005515
Bhi03g02399 890 Pfam Leucine rich repeat 329 388 IPR001611 GO:0005515
Bhi03g02399 890 Gene3D Transferase(Phosphotransferase) domain 1 688 890 - -
Bhi03g02399 890 Pfam Leucine Rich Repeat 450 471 IPR001611 GO:0005515
Bhi03g02399 890 ProSitePatterns Tyrosine protein kinases specific active-site signature. 732 744 IPR008266 GO:0004672|GO:0006468
Bhi03g02399 890 SUPERFAMILY L domain-like 265 516 - -
Bhi03g02399 890 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 8 888 - -
Bhi03g02399 890 Gene3D Ribonuclease Inhibitor 287 523 IPR032675 -
Bhi03g02399 890 SUPERFAMILY Protein kinase-like (PK-like) 609 886 IPR011009 -
Bhi03g02399 890 Pfam Protein kinase domain 613 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g02399 890 Gene3D Ribonuclease Inhibitor 28 175 IPR032675 -
Bhi03g02399 890 Gene3D Phosphorylase Kinase; domain 1 576 687 - -
Bhi03g02399 890 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 888 - -
Bhi03g02399 890 Coils Coil 877 890 - -
Bhi03g02399 890 SUPERFAMILY L domain-like 31 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02399 Bhi-Chr3:53676128 Bhi01g00011 Bhi-Chr1:198303 2.04E-76 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87634 PF00069 Pkinase 1.30E-27 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02399 - - csv:101215786 1641.32