Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02471 ATGGGATCTTCTGTTGCTGCAATGGGCATGGTTTCCGACTCCAAATTCCATGTTCTTGCTGTTGATGATAGCGTTATCGATAGGAAATTGATTGAAAGACTCCTTAAAACCTCCTCTTACCAAGTCACTACGGTTGATTCTGGGAGTAAAGCTTTGGAGTTTTTGGGATATGACCCTGGAAATAACTCGATTCCTTCTGTTTCATCTAACCATCATCATCATCATCAGGAAGTGGATGTGAATCTTGTTATTACTGATTACTGCATGCCTGAGATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGTTCTACAGCTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTGCCTGCAAGAATCAATAGATGCTTAGAAGAAGGGGCAGAAGAATTCTTCTTGAAACCTGTCCGACTTTCGGATGTCAACAGGCTTAGACCCCACATGTTGAAAACCAAACTCAGATGTGACAAACCAGAAAGAACATCAGAAGACCAGCCTGTTCCAGAAAGCCAATCCCAAGCACTAGAGCAGCCGCGGCAACAACAACATCAACAGCATGAACAAGAACAATCACGACCGCTACTGCGACCGCAGCAGATCCCAACATTGCTGCAAGATCAAGATCGAATGCAATCCGTACCACTCCTGCCAACACCGCCACAGGAGCAAGAACAGTTGCAATTACTCACGCCAACACCGCCGCAACAATCCAACAACAACAAGAGGAAGGCAATGGAAGATGGACTTTCTCCAGATAGAACAAGGACTAGATACAATGGTATTACCACCATGGTGTAGTTAATAATGGGCAAACCTTTTTTTTTTTTTTCTTTTTAAAATTTTATTTTATTTTTATTTCTTCCCATCTTCATGCTGGTTAATACAGGCTTTTCTTAGGAATGTAGAGATCAGAATGGTTTTCCTGTATACATATTTCTCATGGAAATATTCCCTTCCCAATTTTGTCAAGCTAATCAAAATCATGACAACAAAAATTAAAAGAAAAAAAAAAATGATGAGTTGTAGCTGTAGATTTCTTTGACATTTCCCAATTTCTTGTTTCTAACTTCACTGA 1087 40.11 MGSSVAAMGMVSDSKFHVLAVDDSVIDRKLIERLLKTSSYQVTTVDSGSKALEFLGYDPGNNSIPSVSSNHHHHHQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDVNRLRPHMLKTKLRCDKPERTSEDQPVPESQSQALEQPRQQQHQQHEQEQSRPLLRPQQIPTLLQDQDRMQSVPLLPTPPQEQEQLQLLTPTPPQQSNNNKRKAMEDGLSPDRTRTRYNGITTMV 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 57553840 57555574 - XM_039026806.1 Bhi03g02471 31248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02471 269 SUPERFAMILY CheY-like 14 161 IPR011006 -
Bhi03g02471 269 CDD REC_typeA_ARR 18 148 - -
Bhi03g02471 269 Gene3D - 17 256 - -
Bhi03g02471 269 MobiDBLite consensus disorder prediction 216 248 - -
Bhi03g02471 269 ProSiteProfiles Response regulatory domain profile. 17 153 IPR001789 GO:0000160
Bhi03g02471 269 Pfam Response regulator receiver domain 18 144 IPR001789 GO:0000160
Bhi03g02471 269 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 267 IPR045279 GO:0009736
Bhi03g02471 269 MobiDBLite consensus disorder prediction 216 269 - -
Bhi03g02471 269 MobiDBLite consensus disorder prediction 169 185 - -
Bhi03g02471 269 MobiDBLite consensus disorder prediction 156 201 - -
Bhi03g02471 269 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 11 267 - -
Bhi03g02471 269 SMART REC_2 16 149 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g02471 Bhi11g02832 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02471 Bhi-Chr3:57553840 Bhi11g02832 Bhi-Chr11:76257742 5.82E-79 dispersed
Bhi03g02471 Bhi-Chr3:57553840 Bhi07g01667 Bhi-Chr7:46703290 4.88E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
797 PF00072 Response_reg 1.40E-18 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02471 K14492 - csv:101220999 434.106