Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02516 AACAAGAAGGAAAAAAAGAAAAGAAAAAAAAATATGAGGGTAAAGAGAGCATCAGCAACAGTACCTCCACGCCCCCGGTCCCTAGTGAGAGAAAAACTAAGAGAAAAAGAGAGAAGAAAAAAAAAAGCTACAAGAAAACAAGATCCACCTCGAACCTCTCTTCATCTTCAACCCTTTTGTGAATTGTGACCCCCCTTCTTCATCATCCATCGCCCTCATAGTTCTTGACCCCCTTCATCTTAATCTTCAGAATCATCCTTGCCCATCTTCCCTTTTCTCTGTTTCTCTGTGTTCTTTTGATTCACAGAAGGATTCTTGTATCTGGGTTTTGTCTATTTCTGTTTATTACTGTTGCTAATCGTATTAATTGACTTGGGTTCTCTTTAGTTTCTGGAAATTTTTGTTGTTTTTGGGCTTCTTCTTGAAAGGGGGGTTTGAACTGTTGACCAGGAGGAAGAACAGTGAATTGGGTTGGAGTTTGATTTGGGGAATAATGAGAGAAGAACACTCGAATTGGTTCTCTAGGTGGGAAGAGGAGCTTCCATCTCCAGATGAATTGATGCCTCTTTCTCAAACCCTAATAACCCCCGATCTAGCTTTGGCTTTTGATATTCAGAATCCTAGCAATAGCAGTCCGCCGTTGCCTTGCCCATCTCCGCCGCTTTCGAATCCTCTGCCTGGCTCTGGCAACGGAATTGCTCCGCCCAACTCGGCGGATTTCGGTGATTCTGCCGATTTGGGCTCCGGCGCCGCCGGTGACGAGCCGGCTCGGACCCTCAAGCGGCCACGCCTTGTTTGGACGCCTCAACTCCACAAGCGTTTCGTCGATGCTGTTGCTCATTTGGGGATCAAAAATGCCGTCCCCAAGACCATAATGCAGCTCATGAGTGTAGATGGCTTGACTAGAGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGGATGCAGGGCTTGTCCGGCGGCGGCGGTGGCGGCGGTGGCGCTTTGGTTGGTTCCTCCGACCCCGCCACCGACCATTTGTTTGCTAGCTCCCCAGTTCCACCCCATTTGCTTCACTCTGCTCGTACTAGTTCAGACCATTTCTTGCCCTTTGTTCCCATGGCCACTCTGCAGCAACACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCTGTCGCCAGCCATTCACAGCTCCAGCCGCCGTATCATCGGCAGGTCGGGCATTTCGGTTCGCCACCGAATGGGCAGTTTGAGCATCCATTTTTAGCTAGACAGTCCCAGCCTATCCATAGAATGGGAGCATCAGTGCATAATTCAGTTCCTAATTACATAGAGGATTTGGAATCAGCCAATGCCAGCGGAGGAAGAAAAGTCCTCACCTTATTTCCTACTGGGGATGATTGAGCTTTGTTTGTTCCTCTTCACTGATCTTTTCTGTTCTGTTCTAATTCTTGTGGAAATTGGTATAAATGTATTATGGGTCTGATCTGAAAATCTTGATGTTATCTTAGTTGTTGTTTCTATATAGTTCTTTCTAATGTACCTCCATATCTATTTAGTTGGCTTGGCTGTCATTAAAATATGAAACTCATGACCAAACCCAAAGTGTTCACTAGCTTACTCCTTTTACATATAGGTAGTAGAGAGACCCATCCCTTTAATGGTGGTAAATAGAGGGAGGTAGGGAGTTTATCTTTCGTCTGTCAAGTTTCCCCCACATGTCCTGTTCTTTATTGGTTGCTGTCTATCATATCTGACGATCAGTTCCTCCTCGTGTGGCTCGAACAGAAAATAATGCAATTAGATTTTTCTGCTTGCAGTTATTCAGATATCAAATTGAGGTTCATAAAATCCAAGAACCTGCTGCTGCTTGTGTAATCAGGGTGGAAGAGGTTCATATGTTGATATTGTTGGGATGAAGAAGCAACCAGCTGAGTTTTATTTTTTGGATTTAGAGCTCGAAGGACGACGGATTATGATGATGCGGGCATGTGATATCTATCCCTAGGTCAGTTTTCTGCAGAGATAGTATTTCTCTCACTTGTATATTATAAAAGTTGAAAAATTCATAGTATTTGAGCATCTATTTTAACAATTCTGAGTTCATTAGAATGTTGGTGTATTGACACTGTTACGTGAACATTTTGATGTGATCATTTTGACATCTCAGTAAATGAATCCATATCTTTTAACCTTATTTCCTTTA 2201 44.16 MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADFGDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGALVGSSDPATDHLFASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVASHSQLQPPYHRQVGHFGSPPNGQFEHPFLARQSQPIHRMGASVHNSVPNYIEDLESANASGGRKVLTLFPTGDD 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 60576885 60579085 + XM_039027045.1 Bhi03g02516 31293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02516 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Bhi03g02516 301 Pfam Myb-like DNA-binding domain 101 149 IPR001005 -
Bhi03g02516 301 Gene3D - 94 156 - -
Bhi03g02516 301 MobiDBLite consensus disorder prediction 1 91 - -
Bhi03g02516 301 SUPERFAMILY Homeodomain-like 94 154 IPR009057 -
Bhi03g02516 301 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Bhi03g02516 301 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 301 - -
Bhi03g02516 301 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 301 IPR044841 GO:0003700|GO:0006355
Bhi03g02516 301 MobiDBLite consensus disorder prediction 1 18 - -
Bhi03g02516 301 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02516 Bhi-Chr3:60576885 Bhi11g02825 Bhi-Chr11:75848906 6.22E-120 dispersed
Bhi03g02516 Bhi-Chr3:60576885 Bhi08g00576 Bhi-Chr8:19099035 5.91E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
801 PF00249 Myb_DNA-binding 2.20E-08 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02516 - - csv:101216969 511.916