Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02748 TTTGGCAATATGGTAAAAAAAAAAGTAGTCAAGTCCATATCAAAATCCAAAATCTCTCTCTCTCTCTCTCTCTCTCTCACGCCGTTCACTTGGCCGCCAAAAGAGCAAGCGCAGAGAAGATCACTCCAAGAGGGAGGGAGAGAGAGAGAGAGAGAGCAGAATTTCAATCTCTGTAGCATCTTATCACTTCCCTCACGATTTCCCAACCCTTCTTCCGATTTGATTCCTGCCGCAGGTCTAGGGATTTTGCTTCCCGACGAACACTATTGTGCTTGGGCAGTTGGTACTGATGGTCCATTCTTAAACTGGGCAGATCAGGCGAGGATGATTGTTTCTTATTCTCATTTTGCTACTGAGAAGTAGTGATTTTGTCTAATTTTCATTTAGTGCCCGGGGAGAATTATGCTTGAATTGGCTGATTTTTGGACTTATTGAAGTAGAATGGCTGAGTAATCTAAGAGCAGGTCTAGCTTGTTTAAGTCATTGTGCTCCGTGACTGATATGATGGTTAAGGAAAATTTGCTGCAGAGGGTAGATGACAATGCTAAAGAGAATGATTGTTTAACTATTGGGAGTGAAGATTTGGGTTCTCAGTCTCGCCACAGTGTAGGGAAGGAATCTGGGGCCAGTTGTCGTGTGTGTCAATGTGTTGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTGGGCATCACTCCTCCAATTATGGAAGCAAGGAAATGCGATGGGGATTCTAAGCCTGAGAAGCAAAGTGCAGAAAATGTTGATGGTGGTTCTGTGCTGAAAAAAGATGTTAAAGAGGATTCTGGTTCAATTAAGTTCATAGGGCCTAATGGGGAGGTTTTCATTTGCAAAGCTGATATTGAGATGGGTTCATGTCATCATGAAGATGCATTAGTGGAGCTTGGGTGCTCTTGCAAGAGTGACCTTGCACTTGTACACTATGCATGTGCTCTTAAGTGGTTTGTAAGCCATGGATCTACAGTTTGTGAAATCTGTGGATGTATTGCAGAAAATATTAGAACCGATGACTTTAGAAAGGTTGTGAGTTCTTTGAAAGAATATGAAGCTTTAAGGGAGAGAACTGTTAGTGGGATACCTAATCCTATGCAGCCTACTGCTAGTACTGATATAGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTAAGTGAAATCTCGTTGTGGTTCAGTCCTCATAATTATAGTAGCAACAATAACTCTACTGCAGCCTCCCAGGTTATTTCTGAACATCTGAATACCATCTCGGAAAATGTTGTTCATGCTGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGGCTGCTTACTGTTACGCTTGCTTGCCTAATAGCTCCTCGTGTGGGGAAGTTTGTGCTTACCAGGATAAAATACGGACCTGCACGATACTGGGCCATTTTGTTCGTCTTTTGGTTCTTGGTGTTTGGTATTTGGGCGTCGAGGACACACGCTGCTCATACGACGTAACTGGGTACATTCTGTACATTCTATTTGGTTGTTTTTCGGTTCTTCACTTCAAGGTGATCTCTCAAAATATACAAGTGTTTGATACTTCTTTAAGGTACTAAAATCTTGATATATATCTTGTAGGGTTTTGATTGTATGTTGTATTTTAGGTTGTATGAGTGTAAAGTTGACATTGGTAAAGGTATATAAGTATCCAACAGGATTCAAAATGCCCTTTAGCTGTATTTCATTGACATCAGAGCTGAGTATTTTTTGTTTGTTAAAAGGATCTTCAATTCTTTTAGAATTTTGGTAAATTGTTCTCATTTTTGGAA 1829 41.33 MMVKENLLQRVDDNAKENDCLTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDAVLGFLGITPPIMEARKCDGDSKPEKQSAENVDGGSVLKKDVKEDSGSIKFIGPNGEVFICKADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRTDDFRKVVSSLKEYEALRERTVSGIPNPMQPTASTDIDPDAVAAVRRQRLSEISLWFSPHNYSSNNNSTAASQVISEHLNTISENVVHAENPATRWAVEGTGILLATGLLTVTLACLIAPRVGKFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70008521 70025636 + XM_039025566.1 Bhi03g02748 31525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02748 337 Pfam RING-variant domain 130 167 IPR011016 GO:0008270
Bhi03g02748 337 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 299 - -
Bhi03g02748 337 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 300 336 - -
Bhi03g02748 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 176 IPR013083 -
Bhi03g02748 337 SUPERFAMILY RING/U-box 131 169 - -
Bhi03g02748 337 ProSiteProfiles Zinc finger RING-CH-type profile. 110 174 IPR011016 GO:0008270
Bhi03g02748 337 PANTHER ZINC FINGER, RING-CH-TYPE 2 299 - -
Bhi03g02748 337 PANTHER ZINC FINGER, RING-CH-TYPE 300 336 - -
Bhi03g02748 337 SMART ringv_2 127 168 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02748 Bhi-Chr3:70008521 Bhi03g02750 Bhi-Chr3:70008525 0 dispersed
Bhi03g02748 Bhi-Chr3:70008521 Bhi03g02749 Bhi-Chr3:70008524 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02748 - - csv:101218157 630.557