Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g02749 GGCAATATGGTAAAAAAAAAAGTAGTCAAGTCCATATCAAAATCCAAAATCTCTCTCTCTCTCTCTCTCTCTCTCACGCCGTTCACTTGGCCGCCAAAAGAGCAAGCGCAGAGAAGATCACTCCAAGAGGGAGGGAGAGAGAGAGAGAGAGAGCAGAATTTCAATCTCTGTAGCATCTTATCACTTCCCTCACGATTTCCCAACCCTTCTTCCGATTTGATTCCTGCCGCAGGTCTAGGGATTTTGCTTCCCGACGAACACTATTGTGCTTGGGCAGTTGGTACTGATGGTCCATTCTTAAACTGGGCAGATCAGGCGAGGATGATTGTTTCTTATTCTCATTTTGCTACTGAGAAGTAGTGATTTTGTCTAATTTTCATTTAGTGCCCGGGGAGAATTATGCTTGAATTGGCTGATTTTTGGACTTATTGAAGTAGAATGGCTGAGTAATCTAAGAGCAGGTCTAGCTTGTTTAAGTCATTGTGCTCCGTGACTGATATGATGGTTAAGGAAAATTTGCTGCAGAGGGTAGATGACAATGCTAAAGAGAATGATTGTTTAACTATTGGGAGTGAAGATTTGGGTTCTCAGTCTCGCCACAGTGTAGGGAAGGAATCTGGGGCCAGTTGTCGTGTGTGTCAATGTGTTGAATCTGACAGAAGAGGTGATGCTGTTTTAGGATTTCTGGGCATCACTCCTCCAATTATGGAAGCAAGGAAATGCGATGGGGATTCTAAGCCTGAGAAGCAAAGTGCAGAAAATGTTGATGGTGGTTCTGTGCTGAAAAAAGATGTTAAAGAGGATTCTGGTTCAATTAAGTTCATAGGGCCTAATGGGGAGGTTTTCATTTGCAAAGCTGATATTGAGATGGGTTCATGTCATCATGAAGATGCATTAGTGGAGCTTGGGTGCTCTTGCAAGAGTGACCTTGCACTTGTACACTATGCATGTGCTCTTAAGTGGTTTGTAAGCCATGGATCTACAGTTTGTGAAATCTGTGGATGTATTGCAGAAAATATTAGAACCGATGACTTTAGAAAGGTTGTGAGTTCTTTGAAAGAATATGAAGCTTTAAGGGAGAGAACTGTTAGTGGGATACCTAATCCTATGCAGCCTACTGCTAGTACTGATATAGATCCTGATGCTGTTGCTGCTGTCCGCAGGCAGCGGCTAAGTGAAATCTCGTTGTGGTTCAGTCCTCATAATTATAGTAGCAACAATAACTCTACTGCAGCCTCCCAGGTTATTTCTGAACATCTGAATACCATCTCGGAAAATGTTGTTCATGCTGAAAATCCTGCAACCAGGTGGGCTGTTGAGGGTACTGGAATTCTCCTTGCTACAGGGCTGCTTACTGTTACGCTTGCTTGCCTAATAGCTCCTCGTGTGGGGAAGAAAACTGCGAAAAGTGGCCTTCATATTCTTCTTGGAGGAGTTTGTGCCTTAACAGTTGTGGTTTTCTTCCGCTTTTTTGTGCTTACCAGGATAAAATACGGACCTGCACGATACTGGGCCATTTTGTTCGTCTTTTGGTTCTTGGTGTTTGGTATTTGGGCGTCGAGGACACACGCTGCTCATACGACGTAACTGGATATATCTCGGAGTTCAAAATCACATCCAAATATGCCTATGCCTCAAGAATTGAAGAGTGGAAGATTAGCTTTACACCATGCGACGAGAAGATCTCATTCAGTGCTTGCTTGCTAAATAAATTTTTTAATCTTTCAAGATTTTCCTAAGTTTCTAGTTTAAGCATTTTTTAGTATATATTTTCTGTTTTTTATTTAACCATTAAGTTAGTTAATTTGTGTCAGTTAATTTCCTAGTATTTTTGGTAAAATTTCTAGTCGAGTATGGAAAATTGTTTGTTCTCTTCGTGATGTGAAGAACTTAGGAGTGTATTGTGTGAGGAAATTGAAAAAATAGGGTGCAAATGTGAATGATGCGTTGACGATGCATTAGTGATGCGTGAAGGGACGTGTGATACTCCTCTTTATGCGTTCAAGTTTTCCTGAATCAAAGCTAACACAGAGCTTGTGTTGTAGCTAATGTAGAAGTATCCTAAGTGAATGCTGAATGGGTTATCTACACTAAGTTTGTTGTGTGCGTGCAAGAAGATACAAAAAGGTCAAGTGGAAAAACAGGGGGTCATGTGAAAATGGTGTTCAGTGCAAGTGGTATGCGTCGATCTAAGTGAAATGTACACGTACAAGAATGTGGTGCAGATGGAAATGACTTTGCTTGCTTATAACTCTATAAATGCATTAGGTTTTTGCTTACTTTTTATTCAGCACTCCTCAATGCGAATGCCACACAAATTCCTATCTTTAGGATGCATGCGTTAATCACAAAATACAATAAAAGTGCCTCTATCTCTAGATGTACCATGCGTTTTTAACTTTATATTTGCTTGCTTATTCTCTCGAATAATTCAAGCTAAAATAGCTTTTATCAAGTGATTATGTTGGCTTAAGCGCTTAGAAATGGACTTTGCATGAAGTTATAGATGCATCTAACACAAGGCAAGAAATAAACAGTAGCAAAGTGTAGTCGATCAAATATGTGAATTCATAAAGAACCATATTGTCTTTATAAGATCAATACTTAATCGAATGCGATGAAGAGAATAGAATTGAGATGAAAAGAAAAGAGTCAAGCTGCAGAGTACAATCTTTTATCCTCTTTGGCTTAATTTAAATTCGTGTACAACTAGCTTGTAGAAGAAATGGAAGAAAATTCTCTCTCGAGCTAAGTTTCTCCACTCCTTGATCAATGGTGGGGGTGGATCTTTTTCTTGTGTTCTTGTCACAGCAGCAAAGCTCTAAGTCTCTAAATTTTGGAATGATACAAATGAGCTGATCTTTTTCTTCTGGTAGGATTTCTTCTATTTGTAGGCATTGCTCTTCATCAGCTTGATGATGGGGCGACAATAAATTCTATACCCTAGTCAACCGCTTGACATTCAGACACTTTTCAGACGCTGCTAGCTACGGATGCCCATGCTTGCAAGTGGTGATTTGACACAAACAGCTTGAGTCAATGAATCTTTGTTGCTTTGAAATCCCTCCGACGCATGTCCATGCGTTGACGTTACTTGCGATACTTAGAATCTTTGTTGAAATCCTGCAATATTATGCATTAGTGACGTAGCTTTCAACAATAAACATTCTTTTGTATGAGTTTGGTAGTGCTTAAGTAATTCCATGCGTTTTCTCCAAGAATGACAAGATTTTATCATTAAAAACCATAATTGTTCCAACTTTGGAGAGACAATAACTTGTATTTCTACAAGTTATAAAAAATTCACTTCCTCCATTTATTGCTCGTCA 3329 39.47 MMVKENLLQRVDDNAKENDCLTIGSEDLGSQSRHSVGKESGASCRVCQCVESDRRGDAVLGFLGITPPIMEARKCDGDSKPEKQSAENVDGGSVLKKDVKEDSGSIKFIGPNGEVFICKADIEMGSCHHEDALVELGCSCKSDLALVHYACALKWFVSHGSTVCEICGCIAENIRTDDFRKVVSSLKEYEALRERTVSGIPNPMQPTASTDIDPDAVAAVRRQRLSEISLWFSPHNYSSNNNSTAASQVISEHLNTISENVVHAENPATRWAVEGTGILLATGLLTVTLACLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHAAHTT 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 70008524 70027546 + XM_039025564.1 Bhi03g02749 31526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g02749 362 Pfam RING-variant domain 130 167 IPR011016 GO:0008270
Bhi03g02749 362 PANTHER ZINC FINGER, RING-CH-TYPE 2 361 - -
Bhi03g02749 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 176 IPR013083 -
Bhi03g02749 362 ProSiteProfiles Zinc finger RING-CH-type profile. 110 174 IPR011016 GO:0008270
Bhi03g02749 362 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 361 - -
Bhi03g02749 362 SMART ringv_2 127 168 IPR011016 GO:0008270
Bhi03g02749 362 SUPERFAMILY RING/U-box 131 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02749 Bhi-Chr3:70008524 Bhi04g02349 Bhi-Chr4:64503502 2.52E-10 dispersed
Bhi03g02748 Bhi-Chr3:70008521 Bhi03g02749 Bhi-Chr3:70008524 0 tandem
Bhi03g02749 Bhi-Chr3:70008524 Bhi03g02750 Bhi-Chr3:70008525 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g02749 - - csv:101218157 689.108