Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00036 TATTTGGAAAATGGCTCTCAATTTGTCACCATTTTTGTCTACAAAAACCCCCCTCTTTTCCCACTCTCACTTCAATTTACAATCACAACATTCAACTTCCCTTCTTCACTATGCCCAGACCACAACAGAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCCGAAATTCGCCATCCCTTATTGAAAACTAGAATTTGGCTTGGTACTTTCGAGACAGCGGAAGATGCTGCGCGAGCATACGACGAAGCTGCGCGCCTTATGTGTGGACCGAGAGCACGTACCAACTTCCCTTACGATGCTTCTCTCTCTCGCTCCTCGTCTTCTCGCCTTCTCTCAGCTACTTTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACTGACTTCTCCATGGCATCCGGCATTGCTCCGATCGAGCGAGTGGAAGCGGACACTACATCGACCGCGAAGAAAATCAAACTGGAGAGCGTGGATTGCGGGGAGCCGTTGATGATTGAGATATTGGATGATGATCATATACAACAAATGATCGAGGAACTGCTTGATTACGGCGGAATTGAGCTTCGTTCTGCTTCTGTTATGCAACCTCAACCCATTTCACATTGACCGTTAAGTCGTCTTCTTCAACTATAAAATTTCAACTCTAATTATATGTACAAAATATCAATTAATTTAGCTAATTTAATTAACCATTAAGGGAGAAAAAAAAAAAAAAAAAAAAAAAACTTTTGATCGTTTGAGGTCATTATTTCCTCTTGGCCAATCCAGATTTGTTTCTCTCTAGTTTGGCCAATTGAGTGGCGGCGCCCCCAATTTATTTCATGTAATATTTTCCAAACTCCTCTGCATCACATTATTATTAATATA 923 43.55 MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDFSMASGIAPIERVEADTTSTAKKIKLESVDCGEPLMIEILDDDHIQQMIEELLDYGGIELRSASVMQPQPISH 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 843250 844258 + XM_039030240.1 Bhi04g00036 31645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00036 183 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bhi04g00036 183 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bhi04g00036 183 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Bhi04g00036 183 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Bhi04g00036 183 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bhi04g00036 183 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Bhi04g00036 183 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Bhi04g00036 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 1 174 - -
Bhi04g00036 183 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 174 - -
Bhi04g00036 183 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00036 Bhi-Chr4:843250 Bhi01g03553 Bhi-Chr1:90359359 6.72E-36 dispersed
Bhi04g00036 Bhi-Chr4:843250 Bhi04g00037 Bhi-Chr4:860884 2.18E-63 tandem
Bhi04g00036 Bhi-Chr4:843250 Bhi09g02975 Bhi-Chr9:77308288 6.07E-69 wgd
Bhi04g00036 Bhi-Chr4:843250 Bhi09g00516 Bhi-Chr9:10878922 2.39E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
828 PF00847 AP2 2.00E-11 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00036 - - csv:101212705 291.582