Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00037 CTTATTAAATCTCATACCCTTATATTTCTCTTTCAGGCATTTTTCCAAACACCTTTCGCTCACTTTAACATATTAACTTCGGGACTAGCTATCTATCTATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGACATTGGGGTTCTTGGGTTTCCGAAATTCGTCACCCTTTATTGAAAACCAGAATTTGGCTTGGTACTTTCGAAACGGCTGAAGATGCTGCCAGAGCTTACGATGAAGCTGCTCGCTTAATGTGCGGTCCAAGAGCAAGAACCAATTTCCCTTTCAATGGAACTGACTCCAATTCCTCTTCTTCCAAACTTCTCTCTGCTAATTTGACTGCAAAACTCCACCGTTGCTACATGGCGTCTCTTCATTTGCAGAAACCCGCCACCCATCGCTTCAATTCCGGCGCCGACGCGGCCGGGATTAAGCCCCTGACGGCGGAGGTAAAGAACCAAACGGAAACCGCTCATCAGCCGTTTGTGGCTCTGGAAGAGGATCATATTGAACAGATGATTGAGGAATTGATTCATTATGGATCTGTTGAGCTCTGTTCTGTTGTGCCACCGTCTCAGACGTTTTGATATTAATTATAAAAAAAATTAAAATTAAAAGCCCATTTTGTTCGAACTTTGGGGATTACATAAATATTGTTAGTTTTTTTTTTTTTATTTTATTTTTTTATTTTATGTAATTGTACTGGATTATTAACAATTAGGTTATCTGTATAATCCGATTATCTTAATGTACTACTGCT 766 40.34 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNGTDSNSSSSKLLSANLTAKLHRCYMASLHLQKPATHRFNSGADAAGIKPLTAEVKNQTETAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPSQTF 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 860884 861748 + XM_039030253.1 Bhi04g00037 31646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00037 164 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 1 105 - -
Bhi04g00037 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 119 158 - -
Bhi04g00037 164 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bhi04g00037 164 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Bhi04g00037 164 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 119 158 - -
Bhi04g00037 164 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 105 - -
Bhi04g00037 164 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00037 Bhi09g02975 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00037 Bhi-Chr4:860884 Bhi09g02975 Bhi-Chr9:77308288 1.59E-68 dispersed
Bhi04g00036 Bhi-Chr4:843250 Bhi04g00037 Bhi-Chr4:860884 2.18E-63 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
829 PF00847 AP2 6.00E-12 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00037 - - csv:101205730 289.271