Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00075 TTTCATTCGTCCATGACTGGATTTCGTCGGCCCCACCGGATAGACTCGTACACGCCTGATTAACTAAAAGAATACTATAGAACCAGAGAGAGAGAGAGAGAGAGAGAGACATTACATACCATTTTCAGTTTTCCGCCATTGGAGCATGGCTTCCAAGCTTTGTGACTCCTGTAAGTCGGCTACGGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTCCTATGCCTTGTCTGTGACTCCAAAGTTCACGCAGCCAACAAACTCGCATCTCGCCATGCTCGCGTTTGGGTCTGTGAAGTTTGCGAGCAAGCTCCTGCTCATGTAACCTGCAAGGCTGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATTCACTCTGCTAACCCTCTCGCTCGCCGTCACGAGCGAGTTCCGGTCACTCCTTTTTACGACACCTCCAACTCCGACAACTCACTCGCCGTTAAACCCAGCGCTGCAATCAACTTCCTCGACGACCGTTACTTCTCCGATGTCGACGCTGATGCCGCCGATGTTAGTAGAGAAGAGGCCGAGGCTGCTTCCTGGCTTCTTCCGAACCCTAACCCTAAAGCAATCGAAACTTCAGATCTGAACTCAGGCAAGTTTGAGTTTCCAGAAATGGATCCTTACCTAGATCTGGATTACGGCCACGTAGATCCGAAATTGGAAGCGCAAGAGCAAAACAGCTCCGGCGCCGATGGAGTTGTTCCTGTTCAGAGCAAAGGCGTCAATCTCTCGTCAGTAAACGATCGTTGCTTCGGCATAGACTTCCCCGTCGCCAAATCTTTCCCGTACGGATACAATCCTCAGTCAATAAGTCACAGTGTATCATCCTCTTCGATCGAGGTCGGAGTGGTGCCGGACGAAAACACGATGACGGATGTATCAAATCCGTACACGAAACCATCGACGGAATCGACGGTACAACCGCTGCAAATCTCGCCGGCGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATCCGATACGCATCTCGTAAGGCTTACGCCGAGACGAGACCTCGAATCAAAGGACGGTTCGCCAAACGGACGGACATCGAACTTGATGTTGACAGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAAGTTTTATTATTTATATAAAATTAATAAAATAATAATAATAATTATATAAAAAAGTTTCTGTGTAAATATGAAGGAAGAAGAAGAATAGTTGGGGGGGTGGAAATGGAGGTTTTGATCGACGAAATCTGGCCGTTGGATCATGTACAACTTTTTTTTTTCTTTTTTTTTTTTTGTAGAACTGAATCTTTTGCCCTTTTTTTTGGTAACGAAAATCTTTGGGAGTTTGGTCAAAAAGGTTTTCGGAAATCTTTTGTTTTTTGTTTTTTGTTTTTTTGTTAATTTTTATTTTTATTTTTAGATTGTGATTTTGTTGAAGCAAGCACGATTAGTTGTATGAAGTCATCTTTATTGTTTTCTTTAGAGAAAGTGTATCAATTTCTGATTCCCTATTGGTGAACTGATTAAGCTTCTTGTTGTTTGGTTTGGACAAATGTTTTCTTTTTATTCC 1607 45.05 MASKLCDSCKSATATLFCRADSAFLCLVCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLAVKPSAAINFLDDRYFSDVDADAADVSREEAEAASWLLPNPNPKAIETSDLNSGKFEFPEMDPYLDLDYGHVDPKLEAQEQNSSGADGVVPVQSKGVNLSSVNDRCFGIDFPVAKSFPYGYNPQSISHSVSSSSIEVGVVPDENTMTDVSNPYTKPSTESTVQPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1964514 1966217 - XM_039028729.1 Bhi04g00075 31684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00075 337 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 337 IPR045281 GO:0009909
Bhi04g00075 337 ProSiteProfiles CCT domain profile. 276 318 IPR010402 GO:0005515
Bhi04g00075 337 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Bhi04g00075 337 MobiDBLite consensus disorder prediction 250 269 - -
Bhi04g00075 337 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 2 337 - -
Bhi04g00075 337 CDD Bbox1_BBX-like 5 48 - -
Bhi04g00075 337 Pfam CCT motif 276 318 IPR010402 GO:0005515
Bhi04g00075 337 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Bhi04g00075 337 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Bhi04g00075 337 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Bhi04g00075 337 SMART bboxneu5 49 91 IPR000315 GO:0008270
Bhi04g00075 337 SMART bboxneu5 1 48 IPR000315 GO:0008270
Bhi04g00075 337 CDD Bbox1_BBX-like 48 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02210 Bhi-Chr1:52511362 Bhi04g00075 Bhi-Chr4:1964514 9.32E-09 dispersed
Bhi03g00887 Bhi-Chr3:16612977 Bhi04g00075 Bhi-Chr4:1964514 7.44E-21 dispersed
Bhi04g00075 Bhi-Chr4:1964514 Bhi06g01274 Bhi-Chr6:38320092 6.35E-58 dispersed
Bhi04g00075 Bhi-Chr4:1964514 Bhi02g00794 Bhi-Chr2:16495557 1.59E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
833 PF00643 zf-B_box 3.60E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00075 - - csv:101208063 630.943