Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00081 GTGATCGTTGTCCTCCTTAACATATTACTGGCTTTGGCGGCGGAGGAGGATGAGGCGGCGGTGGGAGTGAAAGTGAAGGTGGGCGTCGTTTTGAATTTTAATTTTACTTTTGGAAAGATGGGTCTAAGTTGTATTTCAATGGCTCTTGCTGATTTCTATTCTTCTCGGAGTCATTACAAGACAAGAGTGATTCTCAACACCATTGACTCCAATGGCACGGTTGTTGGTGCAGCTGCCGCAGCTTTAGATTTGATAAAGAAAGAGGAAGTACAAAGCATTATAGGTCCAACCACTTCGATGCAAGCAAGTTTCATGATCGATGTTGGAGACAAAGCACAAGTTCCGATCATCTCGTTTTCAGCAACACGACCTTCTCTCACATCCCATCGCAGCTCTTTCTTTTTTCGAGTCGCCCAAGCTGATTCCTTTCAAGTGAAAGCCATTGCAGCAATCATCAAGACCTTCAAATGGCGACAAGTTGTCCCAATCTACGTCGACGATGAGTTTGGTGAGGGTATCATCCCTTACCTTGTCGACGCTCTGCAAGATGTAGATGCGAACGTGCCATACCAAAGCCTCATCTCTCCCACTGCCACCGATGACGAGATCGACCTAAAACTTTCCAATTTAATGACAATGCAAACTAGAGTATTTGTGGTGCACATGTTACCTGACCTTGCTTCAAGACTCTTCACCATGGCAAAAAAGAAGGGAATGATGGGTCGAGGCTACGTTTGGATAATAACGGATGCTATCACAAACGAGTTCAATTCGATAGAACCTTCAATTCTTGATCAATCAATGCAAGGAGTTTTGGGATTAAGAACTTATGTCCCAGGAATCAAACGCCTTGAATCCTTCAAACGTGGTTGGCAGAGGAGATTTTTAAGCTACTATCCAACCATAGAGGAAATTCCTGAGCTAAATGTGTTTGGGTTATGGGCTTATGATGCAGCTTGGGCACTAGCCATCGCGGTCGAGAAGGCCGGTATCAACAATCTTCGATATAGCAAGCCCAATAATGTTACTTTTACCAACATGAAAATGAAGTGTCCATCAAACTATCTGTACAACCTCGGCGTCAATCAAAATGGTGCCAAGCTGCGAGACGCGTTGTCAAATGTTAGGTTTAGAGGGTTAGCTGGTGAGTTCAGTCTCGTCAATGGCCAATTACAATCCTTCGTTTTTGAGATAATGAACGTGGTTGGTAACGATGAAAGGAGCGTCGGGTTTTGGTCGCCAAAAACTGGGCTGACGACGAATCTACGGTACTCAAATGGGTTGAGACCGATCATCTGGCCAGGAGACATAGAGAAGGCACCAAAAGGGTGGGAGATTCCAACGAATGGGAAGAAGTTAAGAGTTGGGGTTCCAGTAAAAGATGGATTTTGGGAGTTTGTGAATGTGGTTCGTGATCCAAAAACAAACGTAACGGAAGTGAGTGGATATTGTATAGATGTGTTCAAGGCTGTGGTTGAAGCTTTACCTTATGCTGTTACTTATGAGTTTATTCCTACTGACAAATCTAATGCACACCCTGGTGGTAGTTACAATGACTTGACTCATCAGCTCTTCCTTGGGAAATTTGATGCTGTTGTGGGTGACATAACGATCCGAGCCAATAGGTCTGAGTACATAGACTATACATTGCCATTCACAGAATCTGGCGTAGCTATGGTCGTGCCAATGAAGAGCAGCAAGAACACCAACGCGTGGGTTTTCTTAAAGCCTCTTACTTGGAAGTTATGGGTGGTCATAGGCAGCTTCTTCGTGTTCGTGGCAATTATTGTATGGATACTTGAACATCGAGTCAACGAGGACTTTAATGGGCGTGCTCTTGACCAGATTTCTACCAGCCTTTGGTACTCATTTTCCACCATGGTTTTCGCCCATCGAGAACATACATACAACAACGGGACAAAATTTGTGGTGATAATATGGTTGTTTGTGGTTCTCATAATTACACAAAGTTACACTGCAAGTTTGGCCTCACTTTTGACAGTTCAAGAGCTCAAACCCACAGTAACTGATATAAACCAGCTTCTTAAAAATGGAGAGAACATCGGGTATCAAGGAGGTTCTTTCGTATATGAGATTCTTAGGTCATTGAAGTTCCACGATTCCCAACTAAAAACTTACCAATCACCAGAACAAATGCATGAACTTTTTCTCAAAGGAAGCATCAATGGAGGAATTTCTGCTGCTGTGGATGAAATCCCTTATATTAAGTTGTTTCTTGCCAAATATTGCTCCCAATATACCACCACAGAGCCCACCTATAAAGCCGATGGATTTGGTTTTGGTTTTCCGATAGGATCGCCATTAGTACCGGATATTTCAAGAGCAATTTTGAAGGTAACAGAGGGCGATAGAATAAGAGAGATTGAAAATGCATGGTTCAAAAAGGTGAAAGAATGTTCAAGTTCGGAAGCCGCTGAAATATCTTCCACCCGCCTCAGTATCGACAGCTTTTGGGTACTTTTTGCCATCACTGCCGGTGTTTCCATAATTTGTGTAACCCTTTACATTACCCTTTTTCTCTATGAAGAAGTGCCTCAATCTTGGAGATCAGCTAATTCTTCCATCTTCAAAACATTAGCTGACTTGGGTTCCAAGTTCTTGGGTACAGATCCTAAAGTTCAAGCTCTTCGAGAAAGTCGCCGACGACGAGATTGA 2676 43.2 MGLSCISMALADFYSSRSHYKTRVILNTIDSNGTVVGAAAAALDLIKKEEVQSIIGPTTSMQASFMIDVGDKAQVPIISFSATRPSLTSHRSSFFFRVAQADSFQVKAIAAIIKTFKWRQVVPIYVDDEFGEGIIPYLVDALQDVDANVPYQSLISPTATDDEIDLKLSNLMTMQTRVFVVHMLPDLASRLFTMAKKKGMMGRGYVWIITDAITNEFNSIEPSILDQSMQGVLGLRTYVPGIKRLESFKRGWQRRFLSYYPTIEEIPELNVFGLWAYDAAWALAIAVEKAGINNLRYSKPNNVTFTNMKMKCPSNYLYNLGVNQNGAKLRDALSNVRFRGLAGEFSLVNGQLQSFVFEIMNVVGNDERSVGFWSPKTGLTTNLRYSNGLRPIIWPGDIEKAPKGWEIPTNGKKLRVGVPVKDGFWEFVNVVRDPKTNVTEVSGYCIDVFKAVVEALPYAVTYEFIPTDKSNAHPGGSYNDLTHQLFLGKFDAVVGDITIRANRSEYIDYTLPFTESGVAMVVPMKSSKNTNAWVFLKPLTWKLWVVIGSFFVFVAIIVWILEHRVNEDFNGRALDQISTSLWYSFSTMVFAHREHTYNNGTKFVVIIWLFVVLIITQSYTASLASLLTVQELKPTVTDINQLLKNGENIGYQGGSFVYEILRSLKFHDSQLKTYQSPEQMHELFLKGSINGGISAAVDEIPYIKLFLAKYCSQYTTTEPTYKADGFGFGFPIGSPLVPDISRAILKVTEGDRIREIENAWFKKVKECSSSEAAEISSTRLSIDSFWVLFAITAGVSIICVTLYITLFLYEEVPQSWRSANSSIFKTLADLGSKFLGTDPKVQALRESRRRRD 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2131784 2136902 - XM_039028879.1 Bhi04g00081 31690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00081 852 Pfam Receptor family ligand binding region 5 364 IPR001828 -
Bhi04g00081 852 SMART GluR_14 413 763 IPR001320 GO:0015276|GO:0016020
Bhi04g00081 852 SUPERFAMILY Periplasmic binding protein-like II 392 762 - -
Bhi04g00081 852 Gene3D - 103 271 - -
Bhi04g00081 852 CDD GluR_Plant 412 761 - -
Bhi04g00081 852 PRINTS Metabotropic glutamate GPCR signature 54 80 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi04g00081 852 PRINTS Metabotropic glutamate GPCR signature 86 105 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi04g00081 852 PRINTS Metabotropic glutamate GPCR signature 105 121 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi04g00081 852 PRINTS Metabotropic glutamate GPCR signature 770 791 IPR000337 GO:0004930|GO:0007186|GO:0016021
Bhi04g00081 852 Gene3D - 413 532 - -
Bhi04g00081 852 Gene3D - 706 769 - -
Bhi04g00081 852 PIRSF IGluLR_plant 1 851 IPR017103 -
Bhi04g00081 852 Pfam Bacterial extracellular solute-binding proteins, family 3 439 762 IPR001638 -
Bhi04g00081 852 Pfam Ligand-gated ion channel 763 794 IPR001320 GO:0015276|GO:0016020
Bhi04g00081 852 CDD PBP1_GABAb_receptor_plant 1 383 IPR044440 -
Bhi04g00081 852 PANTHER GLUTAMATE RECEPTOR 2.9 1 826 - -
Bhi04g00081 852 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 826 - -
Bhi04g00081 852 Gene3D - 533 672 - -
Bhi04g00081 852 SUPERFAMILY Periplasmic binding protein-like I 8 396 IPR028082 -
Bhi04g00081 852 Gene3D - 324 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00801 Bhi-Chr2:16559866 Bhi04g00081 Bhi-Chr4:2131784 0 dispersed
Bhi04g00081 Bhi-Chr4:2131784 Bhi04g01540 Bhi-Chr4:38716587 0 dispersed
Bhi04g00081 Bhi-Chr4:2131784 Bhi04g00082 Bhi-Chr4:2154188 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00081 K05387 - csv:101203550 1419.83