Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00094 ACCCCCAACTCCTTCCCCGTTTTTCTATAATCATTTTTTCCCTCGTTTTTCTCTGCTCCGCCCTTTGCCGTTGGCTGTGTCGGAGACCACCGGAGGACCGCCGTCTCTGCCTCTTAACACACGCCGCCTCCCCCATTCCGCTTTACGCCATCGTGTTTCTCCGGTGTTAGCCAACGGCTTGTATTCTCAATATCCTCTCAACGCCCTCCATTTTTTGATTTCCGATTATATTAACTCAATTCGCTCTCTACGATTGCTGAATTTCTTCATTTGCATTTTGGTTGATTCATCTTCATTTTTTTTTCGTTTCTGGGATTGGTGTTTAGTTTTTGTTCGGCAATAATGAACGGTCATGATACGGAGCCGTTGGTGTACGTTCACGGCGACCTCGATTTGAAGATCATTGAGGCGCGCCGTTTGCCTAATATGGATTTGCTATCGGAACGTATTAGGCGGTTTTTTACTGTTTTTAGTTCTTGTCAGAAACCGTTTTCCAAGAAGAAGGATAAGGAGGATCACCAGCACCACCGGAAGATTATTACTAGTGATCCTTACGTCACCGTCTGTCTTGCTGGAGCGACGGTTGCTCGGACACGAGTTATTTCGAACTCGCAGAACCCTATCTGGAATGAGCACTTCAAAATCCCTCTTGCTCATCCGGTCTCGCAGGTGGAGTTTCATGTCAAGGATAACGATGTGTTTGGTGCGGATTTGATTGGTATTGCAACAGTCCCTGCGCGCAGAGTTCTTTCTGGCGAAACCATAGATGATTGGTTTCCGATTATCGGTTCATTTGGGAAACCGCCGAAGCCGGATTCGGCTGTGCGTTTGGAAATGAAATTCACAAAGTGCGAGGACAATCCTCTGTACCGTTATGGCATTGCGGCCGATCCCGAACATTTTGGCGTTCGGAATTGCTATTTTCCGATACGGCATGGGGGTTCAATAACGCTTTATCAGGACGCACACATTCCTGATTCCATGTTGGAGAAGATTGAATTGGAAAATGGATTGTATCAGCATGAGAATTGCTGGGAGGATATATGCCATGCAATTTTGGAGGCTCACCATTTAGTATACATCGCCGGTTGGTCCATATATCATAAGGTGAAGCTGGTGAGAGAGCCTTCAAAGCCGTTGCCTAATGGTGGGAATTTGAACTTGGGAGAGTTGCTCAAGTACAAGTCACAAGAAGGGGTGCGAGTCTTGTTATTGGTTTGGGATGACAAGACTTCCCACAGCAAATTCTTCATTAATACGACAGGAGTGATGCAAACTCATGATGAGGAGACCCGGAAGTTTTTCAAGCACTCTTCTGTGTCATGTGTGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCATTTTTAAGCAACAGGTTGTTGGAACGCTTTTCACCCATCACCAGAAGTGCGTGATTGTGGATACACAAGCATCTGGAAATTACCGGAAGATAAGTTCTTTTATTGGAGGACTTGACCTTTGTGATGGCCGTTACGATACTCCCGAGCATCGGTTGCTAAAAGATCTTGACACTGTATTTGATAATGATTATCATAATCCAACTTTTTCTGGAGGTACTAAGGGTCCTCGGCAGCCATGGCATGATTTACATTGCAAAATTGAAGGGCCTGCGGCATATGATGTGCTTACTAACTTTGAACAACGATGGCGGAAAGCCACAAAATGGTCTGAATTAGGTCAGCGGTTCAAAAGAGTATCACATTGGCATGAAGATGCTTTAATAAAGTTGGAACGCATATCTTGGATACTTAGTCCATCTCAGTCAGTCCCCAATGATGATCCTATGTTATGGGTTTCCAAGGAAAATGATCCTGACCATTGGCATGTTCAGGTTTTCCGATCCATAGATTCAGGATCTTTGAAAGGATTTCCCAAAGATGTTTTTCAAGCTGAGTTGCAGAATCTGGTTTGTGCAAAAAATTTGGTTATTGACAAGAGTATTCAAACAGCATATATTCAAGCAATAAGATCTGCCCAACACTTCATATACATTGAGAATCAGTATTTTCTTGGATCATCGTTTGCCTGGCCTTCGTACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAGTTGGCGTTGAAGATTGCTAGTAAGATAAGAGCCAATGAGAGGTTTGCTGTCTACATTGTGATACCAATGTGGCCTGAAGGGGCTCCCACTTCTGTTTCTGTGCAAGAAATCCTGTTTTGGCAGGGTCAGACAATCCAAATGATGTATGAAGTCATTGGACGAGAGTTGAAATACAAGAATCTTGAGAACGCTCATCCCTCAGACTACTTAAACTTTTACTGTCTTGGCAATAGGGAACCACACGAGGACTTAACATGTTCCTCTGGTCATTGTTCCAAGAGCGAAGACATGGTTTCAGACTCGCAAAAGTTCCGTAGATTCATGATATATGTGCATGCGAAAGGAATGATTGTTGACGATGAGTATGTAATAGTAGGGTCAGCAAATATAAATCAAAGATCAATGGCTGGTTCAAGGGACACTGAGATTGCCATGGGTGCATATCAACCCACTTACACATGGGGTAAGAAGAAACAACATCCACGAGGCCAGATTTATGGCTATAGAATGTCGCTCTGGGCTGAACATTTGGGAAACATAGACGATTGCTTCAAGGAGCCAGAAAGTTTGACTTGTGTGAACGCAGTCAACAAGATAGCTGAAGATAACTGGAAGAAATACACAGCAACAGAATATACGCCATTGCAAGGGCACCTCCTTAAGTACCCGATCGAGGTCAGCAAAAGTGGGAAGATAGGTCCGTTAACTGGACACGAGACCTTCCCTGACTTTGGTGGTAAGGTCCTTGGAGCTCGATCTAACCTCCCTGATGCTCTTACTACATAAGCTTTTACTCTTCTCGTGGCTTCTTATCAATTTGACTTCTATTTTGAGTTCAATTCTCTTCACTTTCAAGCATGGGAAAGAGAGGCGTATTTGTTCAAGGATGGAGCAGAAACAAAGCCCTAGTAAATTCTTCAACCAATTCTCATAACTTCTCTTTGTTATTAACATTGTTTATAACCATCAAAGGGTCAATTATTCACTTCCCTGATTTGTTTAATTGTATTCAAAGGTATCCCTACGTTCATTCCTTCATAACCTTGGGGGAAAATGTATCTAATTTTATTTATTTTAAGCTATACTCTTTTTAGGGTCTGTTTGGGGTTTTGTTAAAAAATAT 3220 43.04 MNGHDTEPLVYVHGDLDLKIIEARRLPNMDLLSERIRRFFTVFSSCQKPFSKKKDKEDHQHHRKIITSDPYVTVCLAGATVARTRVISNSQNPIWNEHFKIPLAHPVSQVEFHVKDNDVFGADLIGIATVPARRVLSGETIDDWFPIIGSFGKPPKPDSAVRLEMKFTKCEDNPLYRYGIAADPEHFGVRNCYFPIRHGGSITLYQDAHIPDSMLEKIELENGLYQHENCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGNLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVSCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQASGNYRKISSFIGGLDLCDGRYDTPEHRLLKDLDTVFDNDYHNPTFSGGTKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSELGQRFKRVSHWHEDALIKLERISWILSPSQSVPNDDPMLWVSKENDPDHWHVQVFRSIDSGSLKGFPKDVFQAELQNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPMELALKIASKIRANERFAVYIVIPMWPEGAPTSVSVQEILFWQGQTIQMMYEVIGRELKYKNLENAHPSDYLNFYCLGNREPHEDLTCSSGHCSKSEDMVSDSQKFRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGSRDTEIAMGAYQPTYTWGKKKQHPRGQIYGYRMSLWAEHLGNIDDCFKEPESLTCVNAVNKIAEDNWKKYTATEYTPLQGHLLKYPIEVSKSGKIGPLTGHETFPDFGGKVLGARSNLPDALTT 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2513024 2519310 - XM_039028345.1 Bhi04g00094 31703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00094 846 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 169 IPR035892 -
Bhi04g00094 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 692 719 IPR001736 GO:0003824
Bhi04g00094 846 PANTHER PHOSPHOLIPASE D 8 845 IPR015679 -
Bhi04g00094 846 Pfam C2 domain 14 147 IPR000008 -
Bhi04g00094 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 384 IPR001736 GO:0003824
Bhi04g00094 846 PIRSF PLD_plant 1 846 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bhi04g00094 846 Gene3D Endonuclease Chain A 520 739 - -
Bhi04g00094 846 SMART C2_3c 15 144 IPR000008 -
Bhi04g00094 846 Gene3D Endonuclease Chain A 214 467 - -
Bhi04g00094 846 Pfam Phospholipase D Active site motif 693 719 IPR001736 GO:0003824
Bhi04g00094 846 Pfam Phospholipase D Active site motif 350 384 IPR001736 GO:0003824
Bhi04g00094 846 SUPERFAMILY Phospholipase D/nuclease 224 455 - -
Bhi04g00094 846 Gene3D C2 domain 12 175 IPR035892 -
Bhi04g00094 846 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Bhi04g00094 846 Pfam Phospholipase D C terminal 766 836 IPR024632 -
Bhi04g00094 846 CDD C2_plant_PLD 10 168 - -
Bhi04g00094 846 SMART pld_4 692 719 IPR001736 GO:0003824
Bhi04g00094 846 SMART pld_4 349 384 IPR001736 GO:0003824
Bhi04g00094 846 PANTHER PHOSPHOLIPASE D 8 845 - -
Bhi04g00094 846 SUPERFAMILY Phospholipase D/nuclease 538 777 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00810 Bhi-Chr3:14809936 Bhi04g00094 Bhi-Chr4:2513024 0 dispersed
Bhi03g00811 Bhi-Chr3:14809936 Bhi04g00094 Bhi-Chr4:2513024 0 dispersed
Bhi04g00094 Bhi-Chr4:2513024 Bhi11g00355 Bhi-Chr11:8467626 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00094 K01115 - csv:101213442 1675.99