Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00118 GAGAGGCATTTGGTTGAGAATTCGTAAACCATCATTGTTGTTGTAGCAGTGTGATTAGTCAAATTGGCATTAATGGAGAAACTTCTCTCGGCATTTGCTTTCTCTGTTGCTCTTCTCTTCAACTTCTTCTTTACTTCTGTCAATGCATTTACTGCATCCGGATGGTATCCTGCCCACGCTACCTTCTACGGTGATAGCGATGCTTCAGGAACAATGGGTGGAGCTTGTGGATATGGGAATTTGTACCAGACGGGTTACGGGACAAGGACGGCGGCGCTGAGCACAGCGTTGTTCAACGACGGCGCATCGTGCGGTCAGTGTTTCAAGATCATATGCGATTACAAGACGGATCCACGATGGTGCATTAAAGGAGCGTCGGTGACGGTGACGGCCACCAATTTCTGCCCACCAAACTACGCTCTACCAAACAACAATGGCGGATGGTGTAACCCTCCGCTTAAGCATTTCGATATGGCTCAGCCTGCTTGGCAGAAGATCGGTATTTACAGAGGCGGAATCATCCCCGTCCTCTACCAAAGGGTTGCTTGCATAAAGAAAGGAGGAGTGAGATTCACAGTGAATGGAAGAGATTATTTTGAACTAGTTTTGATAAGCAATGTGGGAGGTGCAGGAGACATAAAATCAGTGTCGATTAAAGGCTCAAAATCCAACAATTGGACCCCAATGTCAAGGAATTGGGGGGCCAATTGGCAGTCAAATTCGTATCTGAATGGCCAATCTTTGTCCTTCAAGGTAACCACAAGTGATGGCCAAACCCAAGTATTCAACAACGTTGTGCCTTCATCTTGGAGATTTGGGCAGACCTTTGCTAGCAAGGTTCAATTCGGCTAAGAAAGACCCCGCCACGGGCTTAGGGGTGATCGGATTGGCACTGGCAGAGGCGTGCCCAAGTGGTTTTTTTTTAATCTACGGAAGCAGCCCGCCACTTTATTTCAGCTATCTGGTTACCATCTCACCGACAGGATCCACGACTTTCTTAACTCATCGGAGTTTAATATTGAATTTGTGCCAACAAACTAATAAGAAGCTCAACGAAATTACTTCTGCCTTCAAAACTTCGGAATGTTTAATTACTCATATAAACTTTTTCTTTTTCTTACCTTTAAAGTCATTTTGTAATCTTCGTTTCTAAAAGGTTATTATATAATATATATATATATCTCAACACCTTTGTTTTTTTTTGTTAAA 1209 43.67 MEKLLSAFAFSVALLFNFFFTSVNAFTASGWYPAHATFYGDSDASGTMGGACGYGNLYQTGYGTRTAALSTALFNDGASCGQCFKIICDYKTDPRWCIKGASVTVTATNFCPPNYALPNNNGGWCNPPLKHFDMAQPAWQKIGIYRGGIIPVLYQRVACIKKGGVRFTVNGRDYFELVLISNVGGAGDIKSVSIKGSKSNNWTPMSRNWGANWQSNSYLNGQSLSFKVTTSDGQTQVFNNVVPSSWRFGQTFASKVQFG 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3133777 3136116 - XM_039030062.1 Bhi04g00118 31727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00118 259 Pfam Lytic transglycolase 66 154 IPR009009 -
Bhi04g00118 259 Gene3D - 164 258 IPR036749 -
Bhi04g00118 259 SUPERFAMILY Barwin-like endoglucanases 19 182 IPR036908 -
Bhi04g00118 259 Gene3D - 20 159 IPR036908 -
Bhi04g00118 259 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Bhi04g00118 259 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Bhi04g00118 259 SMART dpbb_1 66 154 IPR007112 -
Bhi04g00118 259 Pfam Expansin C-terminal domain 165 243 IPR007117 -
Bhi04g00118 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 164 IPR007112 -
Bhi04g00118 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 254 IPR007117 -
Bhi04g00118 259 PANTHER EXPANSIN-A15 17 258 IPR002963 GO:0009664
Bhi04g00118 259 PANTHER EXPANSIN 17 258 - -
Bhi04g00118 259 SUPERFAMILY PHL pollen allergen 161 254 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00118 Bhi-Chr4:3133777 Bhi07g00459 Bhi-Chr7:20231745 1.17E-113 dispersed
Bhi11g00747 Bhi-Chr11:19584276 Bhi04g00118 Bhi-Chr4:3133777 2.98E-95 dispersed
Bhi04g00118 Bhi-Chr4:3133777 Bhi07g01546 Bhi-Chr7:44523309 8.62E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00118 - - csv:101216569 500.745