Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00138 TTGGACGTGGAGAGAAAAAAAGAAGAGAGAATGCAATTATTCCTAAATATTTTTAAAAGTATTCTATTTTCATAAATATTTTTAAAAACTACAGTATAATTTCAATTTTACAAAACTAAACACAATAGAAACGCCAATAAATAAATATTTATTTTAGAAGTAGATTTGGTAGTATATAAGGCCTTTTGAAATCGAAGTTATTCCCGCCAATGTTCCAGTACGACGGCGATCGGTCGCAATCGGAAGATGGAGAACGGCAGTCCAGTGCAGTGTCCAAACACGGTGACGGTTCGGAGAAACCCTCACCGGAGAGCAAGAGCTACGCCGGCCGCCAAAGCAGCCGAATCCAATCCTCCATCTGCCATTTCTTCATTTCCATTTCAAGAAATACTTGCAATGGAAGTCCCTCAAAACCCTAAAGACAATTCATCATCATCATCCGTTCCAGCTTCTCTCTCCGAAAACCTGAAAGTGTACCTTAGAGTTCGACCTTTGCAACTGAAGAATTTGAAGAAGTCCGGAAATCCTGGTGATCAAAATTCAAGGTCCGGACATGTATGGCCTCAGAACCCTCAGAAGAAGAAAGTAGCGAAGGAGAAGAATGTTAAGAAGAAGAGCAGTGAGGCTTGTATAACGATTAATGATGATCACTCGGTAACAGTCTGTCCTCCTATGTCATTGCAAGAGACTAGGCGGAGTAAGTCTGAGGTTTACGAAGGATTTTCCCATGTGTTTTCTACGGAATCCTCTCAGGGTGAGGTGTATGAGAGGATGGTTAATCCGTTAGTGGAGGATTTTCTGAAGGGAAAAAGTGGAATGCTGACTGCACTCGGTCCAAGCGGCTCGGGTAAGACGCATACCATTTTTGGTAGTCCAAGAGTTCCTGGTATGGTTCCACTGGCTCTTCAACATATTTTCCAGACAGAGACGAGTGATTCCGAGTCCTTTAGATCATATTATCTATCAATCTTTGAAATATACTCAGAAAAAGGAAAAGGAGAAAAGATGTTAGATCTTTCGGCTGATGGGGGCGAGTTAACTATGCAGCAGTTTAATGTAAAAGGCCTTAAGGAGGTTTTAATTTCTAATGCCGGAGAAGCTGAATCATTAGTGGCTTGTGCAATGGCTAAGCGAGCCACTGCAACTACAAATGCAAATAGCACATCAAGTCGGTCTCAGTGCATCATTAATGTGCGCAGAGTTGCTAACCAAGATGAAGTTGAAGACGCATCGAACTGTGCCATCTTGACCATTGCTGATCTCGCTGGAGCTGAAAAGGAAAAAAGAACTGGGAATCAGGGTACAAGGTTACTTGAAGCTAACTTCATCAATAATACATCAATGGTTTTTGGCTTGTGCCTAAGATCTTTGTTTGAACACCAAAGGAATCCAAAGAAGCCACTGCAGAAGCATTTCCAGAACTCTTTGTTGACCAAGTACCTTCGAGATTACCTGGAAGGAAAGAAGCGAATGACCTTGATTTTAACTGTGAAAGCAGGAGAAGAAGATTATCTTGATACAACTTTCCTTCTCAGACAAGCTTCACCTTATATGAAGATCAAGTTCAACAATGTTGTGGAACCATCCAACACCAACAAGAGACAATTGCAAACGTTATGTATATTTGAGGAGCAGAAAAGAACAAAATATTGTGTTCCTGAAGCTTGTGTGAATGAAGGAAAGGGACATCACGAGGAAGGTCTGCTTTCTCATGAAGAACCTTCAGCTCATACTGAATGTCCAGCCACAAAGTCTAGCTGTACAGAATTGGATGGGATTGAAAGAAACCATTTGATTATGCAAAATTTTGCTAAAGCCATATGGAAAGTCTTGAAGCAGTATAGAGATAAACTAAAGAATGCAGAAAATGAAAATCAAACTCTTCGAGAAGAAATTAGGAAGGAAAAGGTGAGATATTTTGAGCTGGAAAAGCAATGGCAAAATTCAAGATGCAGTACTTGCTCCAAGGAAGATTGTGCCGAAGCTGATTCATCCGTCAAAGTAGTTTCAAGTTTTGAGTTGAAAAGTGATTTGGATGAGCACAAATTCAATGAGGTTCTTGAGATAAATATGAACTCTTTCGTCAAAGTGAAGGAATCTGAGGGAAATAAATCTCCAGAAAGATGTGGTTCCTCTCCCTGTGAAGACATAAATAGTCGCTCAAAACTTGATGAAGTTAAAGAGGTATGCATAAACAATATAGACGAGACCACTCCTAGGAATGAGTGCAACATGACGAAAATACTTACATACGTGGAAGCAGATGATCGTTGTCTGACAACAAATCTTATAGCCTTTGACACCCTGCAGGCCCATAGCTTGGTGAAGCATGACAGCTGTTCATCTGTAGAGTTGGACAAACTCAGTGAGCAAGATGAGGAATCTACCTCAGTTGAATCACCTTTACAAGTAGCCTCGTTTATTCACTGCAATGCTCATGCATGCGAAACTCAACCTGTACTTGATACTTCATTAAACCAACCAACTTCAGAGGAGTCTGATAGGGATTCGGGTACTTTGAATGAAGCCCAGGAACTCGTGGCGGAACTTTCGGATTCTCGAGATGTACATCCCACCAAGGATGTTGAACCTTGTCAAGAACGAGAACGCAACATTGATGTGCATTGCAGTGATCCTACTGACATCTCATGCAAACTAGAGAAACCAAAAAGGAGACTTTTGCCCGCATCATCCACATTATTGAGGGATTTCAGCAATATGCATGTCGAGGATGATATTGAGGCGTCAAAGCAGGTAAACAGAAATGGGAAAAAATCAGCCAAAGGTGAAAAAATTAGAACACAGGGTAACATCTCCCTCATCCGCATGCTGCAGAGTAATCTCCGGTTCTACTCCTAGACGATCCCTTCAAGCATTGCTAGAGCTTTGGCAACTGCAACCCTTCGATGATGGTCAACTGTAGTAAACCCTGGACCACTTTGCTTCAGCAACGTTCCTTATCTCGCATCACGTCGTCTCCTCCAGTTAGGTTTCAACTTTACATCCACACTTAAATTTGCTCATCTTAGGCACCTATGAAGAATCATCCATACCTATGGTAAGCCCCACCCTGGAACAATCATCTTTGAAATGTGTCTTAACTTGTTCATGGACCTATTGCCATTATGTGTTCAGTTGGTTTGATCAGTCAATGTGATCTCAACGACAGATTCTTTGATATGATTGTGTGTTAGTTTAGCATTAGAATA 3209 41.13 MENGSPVQCPNTVTVRRNPHRRARATPAAKAAESNPPSAISSFPFQEILAMEVPQNPKDNSSSSSVPASLSENLKVYLRVRPLQLKNLKKSGNPGDQNSRSGHVWPQNPQKKKVAKEKNVKKKSSEACITINDDHSVTVCPPMSLQETRRSKSEVYEGFSHVFSTESSQGEVYERMVNPLVEDFLKGKSGMLTALGPSGSGKTHTIFGSPRVPGMVPLALQHIFQTETSDSESFRSYYLSIFEIYSEKGKGEKMLDLSADGGELTMQQFNVKGLKEVLISNAGEAESLVACAMAKRATATTNANSTSSRSQCIINVRRVANQDEVEDASNCAILTIADLAGAEKEKRTGNQGTRLLEANFINNTSMVFGLCLRSLFEHQRNPKKPLQKHFQNSLLTKYLRDYLEGKKRMTLILTVKAGEEDYLDTTFLLRQASPYMKIKFNNVVEPSNTNKRQLQTLCIFEEQKRTKYCVPEACVNEGKGHHEEGLLSHEEPSAHTECPATKSSCTELDGIERNHLIMQNFAKAIWKVLKQYRDKLKNAENENQTLREEIRKEKVRYFELEKQWQNSRCSTCSKEDCAEADSSVKVVSSFELKSDLDEHKFNEVLEINMNSFVKVKESEGNKSPERCGSSPCEDINSRSKLDEVKEVCINNIDETTPRNECNMTKILTYVEADDRCLTTNLIAFDTLQAHSLVKHDSCSSVELDKLSEQDEESTSVESPLQVASFIHCNAHACETQPVLDTSLNQPTSEESDRDSGTLNEAQELVAELSDSRDVHPTKDVEPCQERERNIDVHCSDPTDISCKLEKPKRRLLPASSTLLRDFSNMHVEDDIEASKQVNRNGKKSAKGEKIRTQGNISLIRMLQSNLRFYS 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3331196 3345698 + XM_039029599.1 Bhi04g00138 31747

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00138 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 439 IPR027417 -
Bhi04g00138 870 MobiDBLite consensus disorder prediction 110 125 - -
Bhi04g00138 870 MobiDBLite consensus disorder prediction 1 15 - -
Bhi04g00138 870 MobiDBLite consensus disorder prediction 1 43 - -
Bhi04g00138 870 PRINTS Kinesin heavy chain signature 187 208 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 MobiDBLite consensus disorder prediction 87 125 - -
Bhi04g00138 870 Gene3D Kinesin motor domain 69 469 IPR036961 -
Bhi04g00138 870 Pfam Kinesin motor domain 124 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 PANTHER KINESIN-LIKE PROTEIN KIF23 69 713 - -
Bhi04g00138 870 ProSiteProfiles Kinesin motor domain profile. 73 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi04g00138 870 MobiDBLite consensus disorder prediction 90 106 - -
Bhi04g00138 870 PANTHER KINESIN-RELATED 69 713 IPR027640 GO:0003777|GO:0007018
Bhi04g00138 870 Coils Coil 529 563 - -
Bhi04g00138 870 SMART kinesin_4 71 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00138 K10401 KIF18_19; kinesin family member 18/19 - csv:101210482 1428.69
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00134 Bhi-Chr4:3331195 Bhi04g00138 Bhi-Chr4:3331196 0 dispersed
Bhi04g00136 Bhi-Chr4:3331196 Bhi04g00138 Bhi-Chr4:3331196 0 dispersed
Bhi04g00138 Bhi-Chr4:3331196 Bhi03g01609 Bhi-Chr3:34041247 7.26E-27 dispersed
Bhi04g00137 Bhi-Chr4:3331196 Bhi04g00138 Bhi-Chr4:3331196 0 tandem
Bhi04g00138 Bhi-Chr4:3331196 Bhi04g00139 Bhi-Chr4:3331196 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1139 . . . . . . . . . . . . . . . . . Bhi04g00138 . . . Hepe10g0163 . . Cla08g01415 Cam08g1894 Cec08g1471 Cco08g1604 Clacu08g1586 . Cre08g1369 . . . Cone20ag0437 . . . Cme03g01871 Blo17g00740 . Bda08g01213 . . Bpe05g00146 . . . . . Cma12g00402 . . Car15g00615 . . . . . . . . . . . . . . . . Lsi08g01310 Csa02g02143 Chy03g00784 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005587 1 7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 37