Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00158 TCTCCTTTTTTGATTCGTTCGCCGCTTCTACGTACTCTTTCTCTTTCTTCTCTCTCTCTCCTCTTTTTTCCTTCTCTCTCTCTCTTTCCCTCCAATCTTCAAAATCCTCCATATCTCCCTCCCTTTTTCCTCCATCTTTTCCGATGTCGAACGCCGTCGAAGATCTCATCCTCCGCCACCGCCACTCCGATTTCCGATTTCATCTCCTTCGCTCTCACTCTCACCATCGCGACATGTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCAGCTCCAGCTCTTCCGCCTCTGTGTTTCCTTCAGTACCATCGGCCTTCTCCGCCGTCGGATCAGTCCAACGATTGCAACGGCCGTCTTGCTACCGACGCACATTCTGCAGTTGCTACACTAGACTTGAAACGAGCTTATGATATTAATGACTCCGAGGCTTTGGCTAGTAGACAAGTTGTAGCCTCTGAACAGAGGATGCGATCTAATGATTCTTCATGTGAACCAGTATCCATTGGAAAACAAAACAAAAGATCGAAGTTACAGAAAAATTCGAAGTCTAGGACTCAAAAATCAATAGATGAGCCTGTTGATGGTCCTAATCTATCTACTAACGGTCGGTACGACAGCTCGTTAGGCTTCTTGACAAAAAAATTTATCAGGTTAGTTCAGGAGGCTGAAGATGGAACACTTGATTTAAATAAAACTGCAGACGTATTAAAGGTTCAAAAGAGGAGGATTTATGACATTACAAATGTTCTTGAAGGAATTGGTCTCATAGAGAAAACCACGACGAACCACATACGTTGGAAGGGATGCGAGAGGCGTGGGCCTCGAGAGCTCAACGATCAAGTTGGTACATTAAAGGCTGAAGTTAAAAGTTTATATGCAGATGAACGCAGACTTGATGAACTTATAAGGATGAAACAAGAACTTCTGAGAAATCTCGAGGAAAATGCAAATCACAGGAAGAACCTTTTTATAACAGAAGAAGATATCTTGCGAATTCCTTGCTTTAAGAATCAGACACTTATAGCAGTTAAAGCCCCCCAAGCTAGCTGTATTGAAGTGCCCGATCCGGATGAGGAGGCTTGTTTTTCTGAGAGGCAGTGTAGACTGATCATCAAAAGCACCACCGGGCCAATTGATTTGTACCTCTTGAGGACTGCAAAACAAGGGCGGGAAGAAAATATTTCCAAGCAAGCAAAACTATCTTCAATACAGCAGAGGAATCCTAGCATACTTACCAACAGTACTTCTCCTTTCCAAGAATTTCAAGGAATGCAAAGAATTTTACCTGTACATAATAATGTAGACGATGATTACTGGTTCCAATCAAATTCACAAGTGAGTATTACTCATTTATGGGGTGAGGAACACAACTTTTAACTTGTCCCGGAAGACCAACAATCAAGAACCTCTGGTTTTCTTTATGGAGCACGACACAAATTTTTTCCATCAAAGAGGCCATGATGTTTCAACACTTTTCCATTTCTCTTACAGAAATTACCTCCGAAGGAATTCCTCAGAAAATAAAGAGAGTAATAATGAAGTATTATCAACTCTCAGCTCAAAGATATGAAGTGTTTATGTCTATTCTCCACAGTCCACAGCATTTTTGTTGAAGAGGTATGCCTGAGGCCTCCCTACTTACAGCTCCTCTTTTTATTTCCTTACTCTTTCCAAATGCTCAGGGCAATTAATTGTGCTATATATCTACATATCCATATTTATATGATATTGTAATTCATGATTTTGTTCTTTAGACTATAAAACAAAGGTGTTATACTAATAGAAGATGTTGTTTTTCTTTATAAATTTTATGATATTTTCTATTTCTAACTGAGAATTTTAGTTTTCCCTTACCAATAACATAGTAATAGTCAAGTTCCTCTGCCTAATAAAATTACATTAGTGTTTAATTCCTTGGTGTAAGTTTGAGTCTCCGCCCCGGTTACAATCAAATCCTAGTAACAGTCCTCATCTGGGCTTACAAATTTGTAGAAGGTCTCAATGACAATATGTACATGACCTCCTCCAATATGTGTAGTCCAATGTTTTAAAATGTTATTGAAGCTAACACCTTCAGACAAGGCTCTAACTTTTAACTCGAGATTTATGTATTTATTGACCATAAGAGACTTATGCCTTTCTGAAATTTCAATGACTCGTCTAGTAGTTTGAAAAATAATAATGATTTGCCTCATTCTAAAATATAAAAGATTTGGATGGTGACAATTTGAACTATTACTATTTTTACTATTGTGGCTTTGAGGACATTGAAGACAATACTTATAGTATCTATAAATAAGGCCTATTAGTGACCATAGTATGTGAAGTTAAAGATATCCTTTTAGAATTTTTTATTAAGTGAAAATTTATGGGGCAATATTTTATTATTATTATTATTATTATTATTATTATTTACATTTTTATATGACGGTCATGTTTAGCATTACTTGATCATACCAATTTAAGATGTGTAAAATATTTTTTTTATTTAATCTGAGACTTACGCTTTATACTGCGTGACCTCTTCAAGAAG 2532 37.28 MSNAVEDLILRHRHSDFRFHLLRSHSHHRDMSSSSSSSSSSSAPALPPLCFLQYHRPSPPSDQSNDCNGRLATDAHSAVATLDLKRAYDINDSEALASRQVVASEQRMRSNDSSCEPVSIGKQNKRSKLQKNSKSRTQKSIDEPVDGPNLSTNGRYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVLKVQKRRIYDITNVLEGIGLIEKTTTNHIRWKGCERRGPRELNDQVGTLKAEVKSLYADERRLDELIRMKQELLRNLEENANHRKNLFITEEDILRIPCFKNQTLIAVKAPQASCIEVPDPDEEACFSERQCRLIIKSTTGPIDLYLLRTAKQGREENISKQAKLSSIQQRNPSILTNSTSPFQEFQGMQRILPVHNNVDDDYWFQSNSQVSITHLWGEEHNF 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3863848 3869505 + XM_039030796.1 Bhi04g00158 31767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00158 410 SMART E2F_TDP_2 155 220 IPR003316 GO:0005667|GO:0006355
Bhi04g00158 410 Coils Coil 247 270 - -
Bhi04g00158 410 Gene3D - 227 337 - -
Bhi04g00158 410 Gene3D - 150 222 IPR036388 -
Bhi04g00158 410 Pfam E2F/DP family winged-helix DNA-binding domain 157 220 IPR003316 GO:0005667|GO:0006355
Bhi04g00158 410 SUPERFAMILY Winged helix DNA-binding domain 155 218 IPR036390 -
Bhi04g00158 410 MobiDBLite consensus disorder prediction 50 70 - -
Bhi04g00158 410 SUPERFAMILY E2F-DP heterodimerization region 232 335 IPR037241 -
Bhi04g00158 410 MobiDBLite consensus disorder prediction 101 126 - -
Bhi04g00158 410 Pfam E2F transcription factor CC-MB domain 236 335 IPR032198 GO:0046983
Bhi04g00158 410 PANTHER TRANSCRIPTION FACTOR E2FC 24 407 - -
Bhi04g00158 410 PANTHER TRANSCRIPTION FACTOR E2F 24 407 IPR015633 GO:0000978|GO:0006357
Bhi04g00158 410 MobiDBLite consensus disorder prediction 101 154 - -
Bhi04g00158 410 CDD E2F_DD 231 335 IPR032198 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00158 Bhi-Chr4:3863848 Bhi10g00182 Bhi-Chr10:3975320 2.73E-80 dispersed
Bhi04g00158 Bhi-Chr4:3863848 Bhi08g01449 Bhi-Chr8:42588827 3.90E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
834 PF16421 E2F_CC-MB 1.40E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00158 K06620 - csv:101211469 665.225