Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00169 GTAGGATTAAAAGAATATATATTTTTTCAGAGAAAAGAAGAAAAAAAAATCCGCTCGTTGCATAATCAATTCATAACTGAGAAGCATCCCCGCTCTCCGGCATGACAACAATCGGATTCCGCCTTACCCCGGTTCGTGCCGCCGTGTCACCACCTTCTCCACTTTCTCAAAATCCTAACAATGATCCATTCCAAGAAAGCCAACCACCGCGCCATCAACTTCCGATTACAACATCTCGCAGAGGCCTCACCATGCTCTCATTTATCTCTGCGGTGCCGTCTCTGTTTCTACCCGCTCCCGCCACTGCTTTCAATATCGGCATTTCAGGACCAAAGGATTGGCTGAAGGAGCAGAAGAAGAAGGCCTCCAAATTCCTCTTGGCACCAATTGAGGCCTCCAGAGACAGCCTTCAAACAGTTCACCTTTTGCTTTCCAACGATTCCGATTACTCAAACAAGGATATGGAGGATGTTCATAGACTGCTTAAGTCTGCTGCAAGGGATTGCGTTTTGAAGGACAGGAATTCGTTTGTTCAATTTCAAGCGAGCACTGGAGTCGAGGTCTGTACATTTCAATTGATTGTGAAAAATGCATCCTCCTTGCTTGGAAACAAAGATCCTATAAAACTAGAAGCTGAAAGTCTATTAAAAGATCTACTCTTTCACTTTTCTTAATAGTCTTGCATATGAAACTGATATTCAAGTCGATTCCAATAGACAAAGGGTACTGGACGCACTAAATGATACCATGTCTTCCCTCGACAAATTTGAGAAGGGTATTAAGGATTGTCTTGAAATTTAAGTCCAATTATTTATTTTTTTGTAATTATATTTTTCTTGTCCAAACAAGCGACAACTAGATGAAACCAAAAGCAATGCTGTCGATATATCTATGATTTAAAAGTTAAAATGGATGTACACCCTATCATA 929 40.8 MTTIGFRLTPVRAAVSPPSPLSQNPNNDPFQESQPPRHQLPITTSRRGLTMLSFISAVPSLFLPAPATAFNIGISGPKDWLKEQKKKASKFLLAPIEASRDSLQTVHLLLSNDSDYSNKDMEDVHRLLKSAARDCVLKDRNSFVQFQASTGVEVCTFQLIVKNASSLLGNKDPIKLEAESLLKDLLFHFS 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4110404 4112616 + XM_039028930.1 Bhi04g00169 31778

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00169 190 PANTHER PLASMA MEMBRANE FUSION PROTEIN 2 190 - -
Bhi04g00169 190 MobiDBLite consensus disorder prediction 16 41 - -
Bhi04g00169 190 MobiDBLite consensus disorder prediction 1 41 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00169 - - - bhj:120075490 360.918
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00168 Bhi-Chr4:4110404 Bhi04g00169 Bhi-Chr4:4110404 5.52E-136 tandem
Bhi04g00169 Bhi-Chr4:4110404 Bhi04g00170 Bhi-Chr4:4110405 4.22E-136 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g944 . . . . . . . . Cmo05g00250 . . . . . . . . Bhi04g00169 . . . Hepe10g0636 . . . . . . . . . . . Cone17ag1341 Cone20ag0140 . . . . Blo17g00802 . Bda08g01286 . . Bpe05g00089 . Bma05g00118 . . . . Cma05g00242 Car05g00203 . Cpe11g00201 . . . . . . . . . . . . . . . . . Chy03g01459 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009289 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00169 Bhi_Chr04 FPKM 0.0 0.0 9.168821 7.362583 109.764938 118.262703 116.572464 0.513131 0.197942 0.447497