Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00198 TAAATAACCAAATTGCAATATTTACCAGAGGCGGAATCAAAATAATCCATCAATTCATTCGCATGTCCTTATCGCAGCTGCCTCAGGAGGAGCTGAGACTTGAGACCAAATCTCCTTCCCATCACATGGGGATCAATTTGTTTTGAAACCCCATTAGAAATCATTCTGAGTTCTCGTTGACTGCGACCCATTTCGAAACCCCATCTAATTAGCAAGAAATTTCTACTTCCACTCTCAATTCACTCGATTCCTCGCTTTTTTGCTTCCAATTCGAGCTGGGGTTCTGTTAATTTAAGGGTTTTTCTTCTTTCCCCACTTGGGGTTTCTCTCTTCCTTCTGATTCTATCATGGGATCTACTGCTTTCCACTTTCTTCAAGGTTTTGGGGCTTAATTTGAGCTGGGGCAAGTTTATTTCATGCTTGGAGTTCGTGTGGTTGAAGATACGAGAAAGCGATGTAGCAGGGAACTGAGGACGAGGATTTGACTGATTTTTCTTTGAATTTGCTCGTTTAAGAACAAGTGGTGATTGGGAATGGCGACCCCTGTTGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAACATTACTATTCAATGTGGCAGACATTATTTGAGATTGATACTAAATATGTTCCCATCAAGCCTATTGGTCGAGGGGCATATGGTATAGTGTGTTCTTCTGTGAATAGGGAAACAAACGAGAAAGTTGCAATAAAGAGGATACATAATGCGTTTGAGAATCGTATCGATGCGCTCCGGACTTTGCGCGAATTGAAACTCCTTAGGCATCTTCGCCACGAAAATGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTCAAAGATGTTTATTTGGTTTATGAACTGATGGATACTGATCTGCATCAGATTATTAAGTCTTCTCAAACTCTTACCAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTCCGAGGCCTAAAGTATCTGCATTCTGCAAACATCCTACATCGGGACTTGAAGCCAGGGAACCTCCTCGTCAATGCAAATTGTGATCTTAAGATATGTGATTTTGGGTTAGCACGTACGAGCAACGGGAAGAATCAATTTATGACAGAGTATGTCGTAACTCGCTGGTATCGGGCCCCAGAATTGCTGCTCTGCTGCGAGAATTATGGGACGTCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCCGAGCTTCTCGGTAGGAAACCTATCTTCCCGGGTACGGAATGTTTGAATCAACTCAAATTGATAATTAACATACTGGGTAGCCAAAGAGAGGAAGATCTTGAGTTCATAGACAATCAGAAGGCAAGGAGATATATAAAATCCCTTCCATACTCTCCTGGGGCTCCTCTTTCCCGTCTTTATCCGAACGCTCATCCTCTAGCAATCGATCTGCTACAAAAGATGCTTGTCTTTGACCCATCAAAGAGGATTGGTGTAACTGAGGCGTTGCAACATCCTTACATGTCCCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTGCCGATCGATCTTGACATTGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCTGAAGGTCTTGAAGAACACGCAGAAATGACATGTTTCCATCCCGAACCTACTACGAGTAGTACTGCAGTGTATTCTTGACCGAATCTTGTTAGCAATCCAGCTTAGAAGCTTTGCAGGGTGATGATGGTGACAAACAATCCGCTCCTTCCCCATTTCGTTTCTATATCGAATAGCTCGGTAATAATTATCTAGTAACTTCCTTCTGCTGCCCCACCCTCGTCGCCTAGGGAAAAATGGTGGTCCTGTAATAATGAATTAATGTTGAAACAAGCATGCATTAGAGGGTTTTTTTTTTCTGCTACAAGCATGTCTGTCTGTTTGGTATTCAAGAACCTTGTTTGGGCTGGTCTTGTTTGTTCTTGTAAATAGGTCGGTTTGGATTATGGAATCCCTGTTTCTGTCTTTGAATTAGGATGTTTCTTAGACTCTATTTTGCTTGCAATGTTGAGTTTCAATCTTCCCTAATGTTA 2086 42.04 MATPVEPPNGVRSQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNQKARRYIKSLPYSPGAPLSRLYPNAHPLAIDLLQKMLVFDPSKRIGVTEALQHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEGLEEHAEMTCFHPEPTTSSTAVYS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4858824 4862874 + XM_039029296.1 Bhi04g00198 31807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00198 386 CDD STKc_TEY_MAPK 26 361 - -
Bhi04g00198 386 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00198 386 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Bhi04g00198 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bhi04g00198 386 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bhi04g00198 386 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Bhi04g00198 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Bhi04g00198 386 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Bhi04g00198 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Bhi04g00198 386 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00198 386 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00198 386 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00198 Bhi-Chr4:4858824 Bhi12g01884 Bhi-Chr12:60337272 2.75E-153 dispersed
Bhi04g00197 Bhi-Chr4:4858820 Bhi04g00198 Bhi-Chr4:4858824 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87650 PF00069 Pkinase 1.60E-71 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00198 K20535 - csv:101213478 761.14