Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00212 GAGTCCTATCTGAAAAATCGTGCTTCTTTCTATTATTACCAATCCGATGTTTTTGGATAGAAAGTCTACATACAGTGGCAGAACAAAATAAAAATTGAAGAAAGCAATCTGGAATTTTGCTCGTGGAGAGACCAAAATATGGCCATGTGTGTGCAAGACATAATCCCAGAAGAGCTGCTCATCCTATGGACACGATTTCTTGTGTTCTTCTTGCCATGTATCATCTTTTCTTCTCTTGAAGCCACGTTTCATTCTTCCTTCTTCCGTTTTTAATACCCCATTTCCCATTCCAAGTTTCCCACTCCCAAAAATCTCTTCTTTGTTCTTTTTTTCCCTTCTTTCCTTCCTTAGAATATGTTGAAATCTTCTTCATCCAACAACAACAAAAGACCCTCTTCAAGAAAGGGTTGTATGAGAGGCAAAGGAGGCCCTGAAAATGCTTCTTGTACTTATAAAGGCGTTCGTCAAAGGACATGGGGTAAATGGGTTGCTGAAATTCGAGAACCAAATCGTGGAGCTCGTCTTTGGCTTGGTACTTTTGATACTTCTCATGATGCTGCTTTGGCTTATGATAATGCTGCTCGTCGTCTTTATGGCTCTGATGCTAAACTCAATCTCCCTGTTTCTGCTTCCACTTCTTCTTCTTCTGATAGTGTTGCTGCTAATGCTAATGTTAATGTCAATGCCATGGTGGAAGATGTTGCTTCTTCCTCTGTTTCTAATGAAAACAGCAGCAACACTGTATTGCCTAAGAAGAGATTTAGGGAAGAGGAGGAAGAACAAATTGGAGGGCTTTGGAGAGCTATGAGTATTAGTGTAGATGATTCTCTTTGGGTTGAAGCAGCTATGTCTTTGGATTTTCCTGTTGTTATGGATCAAGGCTGTTTTTCTGCTAATTTGATGGATACAAATGGAAATGGTGGATGGGATTCACTCCAATGGTGTTTATGAAACAAACAACCCCTTCAACACAAGAAAACTAGAATGATTTGTAATTCTAAAGTTGTATTGTTGTAATTTTCTCAAGTGGGATTGTATTATATAGGGTTAGAGGTCTTTCTTCTTCTTCTTCTATTCTTGTTGGTTTGGGGCTGTTTGGATTGAAAGCTATTATCCTGTAAATAAATATATAAAATTATTGTGTATTTGGAGAGATGGGTGTATACATATTGTCAGTTTTTTTTGTTCTGTTTAACTTTTTGAGTATTTCTTTTTTTAATGAAAACTTGCGAGTGGGGAGTGTTTTGTTTTCACTCTGATTGATGTCATAATTTTCTCTACAAAAGTTTGATTCTATATTGCAAGTGG 1308 37.31 MLKSSSSNNNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPVSASTSSSSDSVAANANVNVNAMVEDVASSSVSNENSSNTVLPKKRFREEEEEQIGGLWRAMSISVDDSLWVEAAMSLDFPVVMDQGCFSANLMDTNGNGGWDSLQWCL 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5156137 5157444 + XM_039028938.1 Bhi04g00212 31821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00212 198 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Bhi04g00212 198 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Bhi04g00212 198 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Bhi04g00212 198 MobiDBLite consensus disorder prediction 1 31 - -
Bhi04g00212 198 MobiDBLite consensus disorder prediction 1 15 - -
Bhi04g00212 198 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Bhi04g00212 198 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Bhi04g00212 198 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Bhi04g00212 198 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 9 127 - -
Bhi04g00212 198 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 105 191 - -
Bhi04g00212 198 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Bhi04g00212 198 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 105 191 - -
Bhi04g00212 198 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 127 - -
Bhi04g00212 198 CDD AP2 31 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00212 Bhi-Chr4:5156137 Bhi04g02286 Bhi-Chr4:62588823 6.77E-29 dispersed
Bhi11g02691 Bhi-Chr11:72201535 Bhi04g00212 Bhi-Chr4:5156137 5.88E-33 transposed
Bhi04g00212 Bhi-Chr4:5156137 Bhi09g02198 Bhi-Chr9:61802218 4.03E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
838 PF00847 AP2 2.30E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00212 - - csv:101213875 256.914