Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00258 TTTCTCGACTCTCACATCATCCTAAGCGCAATCATCAACCGAAGCACAAGAAAAAGGGTTTTCTTTGTTCTATCTATCCCGCTCTCTCTCTCTCTCTCTGCAACTCTCTACGAGATCATCCATGGCCGGCCGTTTCGACTTTGGTTCTCGTCCCAATCTCTCTGTCTCCAGTCCTCTCCATGCTGCCAATGATGTTCAGGGATCTGAAAATCCAATTCCTCTTTCACCACAGTGGCTTCTGCCTAAGCCAGGGGAGAGTAAGCATGGAATTGGAACTGGGGAGAACCATTTCAGTCATCAACCTGCTTATGGGAATCGCATGGACACGATGAAGGGATCTGAGAATTATGAGGATATAAATGACATACAGAAGAAAAAAGAAGTTTTTAGGCCATCCCTGACCGATTCTGAAATTGGTAGGCGTGACCGTTGGCATGATGAAGAAAGAGAAAATAATTCTTCAATGCGTAAAGATCGTTGGAGGGATGGTGAGAAAGAGATGGGTGATAGTCGCAAGATGGATCGTTGGAATGAAGACTCATCCACAAGAGTCTTTAGAGAATCTCGTCGAGGCCCATCCGAACGATGGTCTGATTCAAACAATCGGGATAATGTCCATTATGATCAACGCCGTGAGAGCAAATGGAATACACGTTGGGGCCCTGATGATAAGGAAACTGAAGGCTTTCGTGAGAAGCGGCTGGACTCTGGAAGAGATGGTGATTTGCATCTTGACAAAAATTTATCTCATGTGTCCAATTATGGGAAAAATGACAGAGATGGAGATCATTATCGCCCATGGAGGTCTAATTCCTCGCAGGTTCGAGGTAAGGGAGATCCTCCTCACCATCAATCCCAAACTCCAATTAAACAAGTCCCTGCATTTTCCCATCGTGGACGTGGAGACAACACACCTCCTACCTTCTCTTTAGGTCGTGGAATCATCAGTTCTGGTGTAAATCCTACCAATAGTATTTATTCATCTTCTAATTATCTTGGAGCTTCTTCTGAGAAATCTGGAAGAGAGCCTTACCACTACAAATATAGCAGAACAAAGTTGCTTGATGTTTTCCGGACTACCAATCTGACATCACAGCAAACTCCAAAAGATGGATTTGTGCCCGTGCCTACTCTTACGCTGGATGAACCTTTGGAGCCTCTTGCTCTTTGTGCACCAACTACGGAAGAAATGACTTTCTTGAAGGGGATTGATAAAGGGGAAATTGTCAGTAGTGGTGCACCTCAAGTGTCAAAGGATGGTCGAAACTCATCAGAATTTATGCAAACAAGACGAACAAAACTGAGCGTTTCACCTTCCTTAGGCAGTAGAGAGGATTTACCTCATGGCTTTGTTGATGATTACAACGATGATAAGGATGACGGCACCACTAAACCTGGTCACACAAACTATTCAGAGGTCTCTACTGAGAGGCAGGTGCCTTATCACAGGCCCCAGTCAAAAATTGAAGCCATTCAGGAACACATGACGCATACTAGTAGCACCTTCAAATCTGAAGCTTTCAGAGAAGATAACAATGCTATGAGAAAAACAGATGAGGTGCCTGTCAATAGGGAATCAAGTGTCAAGGGGGGTACCAATGTTCATCCTGGCAGCACGTGGGATGCCTCATCACTTGAGCAACCCCTGAATACATCCTTGCCTGATCGGAGAGAAAATCCTAATAATATTAGCTCAGGAACTCCTGACAAGGGTTGGCTACAGTCTTCAAAGAATCTTAATGATGGGTGGGGAAGTAACACAGCTACTCCATCTTATCCGAAGGATAATCCCAAATGGCAGACCGGTGAAGAGTCTATCATCAGAAGACAGCTTTCAGGGATTTTGGACAAGGAACAACTAGCAAGGAAAACTGTTCAATCTGCTCCAGAGGATTTGCAACTTCATTACATCGATCCTTCTGGTGCAATTCAGGGCCCTTTTAGTGGGGCTGACATTATTCAGTGGTTTGAGGGTGGGTATTTTGGTTTAGATTTGCCTGTCCGTCCCGTAAATGCACCAAATGACTTGCCATTTGCAGCACTTGGTGATGTTATGCCTCATTTACGATCTAAAGCCAAGCCACCACCAGGATTTAGTGGACCAAAGCAGAATGAATTTGCAGATTCATTAGGTAACGCTAGTTATGGTAGCTTAGGAAAGCTTCATACTGGCTTGAATGAGATAGATACTATGAGGAATGAGACAAGGCATAAACATGGCTCAACGGTGGAAGCTGAAAACAGATTTTTGGAGTCACTTATGTCTGGTAATATAGGTTCTTCACCTCTCGAGAAAAATGCCTTTTCTGAAGGTGTGCCAGGATATTTTGGAAATAATTCTAGTAGTCTGTCTTCGTTGGGAATAGACAATGGAAACAACCTTTTCTTGTTGGCCAAAAGAATGGAACTAGAACGACAAAGGTCTTTGTCTAACCCTTATGCATTTTGGCCTGGAATAGATGCTACATCCAAGGTTTCTAAGCCGGATATTGGCTTAGATGATCCAATTCAGCAAGCCAAACTCTTGTCTTCAATCATAGACCATTCTCGTCAAACTTCTCATTCTCAAGGTGCTGACATGTCAGCCATTCTACAAGGCTTATCTGACAAAGCACCTCCTGGCATTAATGACGTTGCTGGCTGGTCAAAATTTGCTCAGTGTGCTCCTGATCCTCTCCAAAGTAAACTTGACTTGCACCATGATCTTAACTTGTCTTCGCAGGCACCATTTGGTTTCCAACAACAGAGATTGCAACCACAGCCTTCCTTGACAAATTTACTTGCTCAAGCTACTGATAATCCTACCTTAACTCCAGATAAGTTTCTTCCTTCCAGCTTATCTCAAGACCCACAACTAATAAGTAAATTGCAACAACAACACCTGTTGCAGTTGCATTCTCAAGTGCCTTTCTCCGCACAACAAATGTCATTGTTGGACAAACTTTTATTACTTAAGCAGCAGCAAAAACAAGAGGAGCAACAACAGTTATTACAGCAACAGCAGTTGCTCTCGCAGGTTCTATCAGAGCATCAGTCACGACAGCATTTTATTGATCCATCTTTTGGACAGTTACAAGGTGCTCCTATGCCTATTGGAAATGCATCTACTGATCCAGCTCAAGTCCAGCAATCACGAGAGAAGTTTCAAATTGGTTCACAGAAGCCCCTAAATGTCGTAACTGATCGTGCAGCTCCCTTCGGAAATATGGCTTTGCAAGTTACCCAGGGAGCCAGTTACAATGTTAATTTAGAAGACCCGCCGCTTGCTCTTCCACATCAAATGTTTGGAAATGTTGTTCAGCAGAAGAGTTGGACTCCTGCACTCTCAGAGCAGCTTAATGATACTTGTCCAAATGATATGTTACCTGGATCTAAAGTTGCCGAGGGCTCACTTTTTCCTGGGTTGACTGCCCAATCAAACGAGGATGTGAATCTTGTGCCAAAGTCATCTGACAGCCACACTAGTAAAGCTTTGGAGCAGATAGCAGAGGATGTACCAAGGCTGGATGCAACTGTCACATCTCTTGCATCTGATGCTTTGGTAGAACCTCTTCCTCTCAAGACTGCTGAAATCTCTGTTGCCATACAACCAGCAGAAGTTCACGATTTTGAAATTTCCATTCCCGATAGTGTACCTGCTTTGAAGGTTCAAGAAGCTAGTATGCCCGTGGAAAAACTTGAAAGGGATGTATGCAAAGATGAGACCTCCTTGGAGACAGAACTGAAAAATGTTGAAGTACAAGAACCTAGAAAATCTTCTGATAAGAAGACGAAGAAGCAAAAATCTTCGAAGTTGCTTTCCTCAGACCAGGCAAAGGATTCTAAGAGTTCTGCTATTCAGCAGTTAAAACAATCAAAAAGTGGGAAATCAGAAAATGATTTGAAATTGAAGGCAGATAATATTGTAGGAAAATCAAGTGATACTTCTTCCTCTCCTCGGAAGATCAGAGATGGGGATGGCAAAACTTCTGTTGTGGATAGTCAGCCAGTTCAAAGCTCTGCCTCTGCTATAAATACCTGGAATGATGGTGAAACTATTCAAATGAAGGATGATGCCAGACTAGTTGGGTCTGACTCTGTGCTTAACTCACAAACGCAATCTGGCCAAAGAGCTTGGAAAGTTGCTTCGAGTTTCAAGCCAAAGTCGTTATTGGAAATTCAGGAGGAAGAGCAGAAAAGGGCACATACAGAAACTGCTGTATCAGACATTTCCACTTCTATCAACTCTATGAGTTTATCGACTCCTTGGGCTGGGATCGTGAGCAGTTCAGACCCTAAAACTTCCAGAGAAATTCATAAAGATTCTGGGATTTCAGAATCAAGTGAGAAACATGAAAATTTATTGACTTCAAGGAGTAGAAAGAGCCAATTGCATGATCTGCTGGCGGAAGATGATATGGAAAAGTCAACTGCAGGCGATGTTCGTGTTTCTGACTCTGTACAGATTGCTTCTTCTCCTCGTGTCATGGCCACACAAGCAGAACCATTGGATGACAATTTTATTGAGGCAAAAGACACCAAAAAGAGCCGCAAGAAGTCCGCTAAGGCTAAGGGCGTTGGTACCAAGGCCACCCCTGCAGTCCCTTCTGCTGATGTGGTTGCTTCAAGTCCTATTGAGAAAGGGAAAATCTCCCGCCAGACCCAGCAGGAGAAGGAAGCAATGCCTGCCATTCCTTCTGGACCTTCTTTTGGTGATTTTGTTCTGTGGAAGGGAGAAACTGCTAACGTGGCCCCTCCTCCAGCATGGTCCAGTGACTCTGGGAAGGTCCCAAAACCCACATCTTTGAGGGATATTCAGAAGGAGCAGGGAAGAAAAATCTCTGCTGCTCAGCATTCTCATCAAAACCCTACTCCCCAGAAGGCTCAGCCTACTCAGGCTGGTCGTAGCAGCAGCACCAGTACTCCTTCCTGGGCTCTCTCGGCATCTTCTCCATCAAAGGCTGCATCATCCCCCCTTCAGAATATTCCTACTCAGTCAAAACATGGAGGCGATGATGACTTATTTTGGGGCCCCATTGAGGCAAAGCAAGAAAATCAGCAGGTTGATGTCCGCCTTGGGAGCCACGGCAGCTGGGGAAATAGGAGCGCCTCTGCAAAAGCAGTAGCATCGACTGGGTTGTTAAGCCGGCAAAAATCATCTGGTGGCAAAGCTGACTATCTTTCATCCTCACCTGCACAGTCGTCTCAGAAAGGCAAACAAGATCCAGTTACCAAGCACTCAGAAGCTATGGGCTTCCGTGATTGGTGTGAGAGTGAATGTGTACGGCTCATTGGGACAAAAGACACAAGTTTTCTGGAATTCTGCTTGAAGCAATCAAGATCCGAGGCAGAGCTTTTTTTGATAGAGAACCTTGGATCATATGATCCTGACCATGACTTCATCGATCAATTCCTCAATTACAAGGAGTTGCTCCCAGCAGATGTTCTTGAAATTGCATTTCAAAGTCGCAACGATAGGAAGGTATCTGCTATAGCTTCCCGAGAAGTAAATTCTGGCAATGCTGGTGGGGATGTGGACCCTGATGTCCCTCTTGGCCGTGATGGGTCCGCAAAGAGTGGAGGAAAGAAGAAAGGAAAGAAAGGGAAGAAGGTTAGTCCATCAGTTTTGGGTTTCAATGTAGTTAGTAACCGAATCATGATGGGTGAGATTCAGACGGTTGAAGATTAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAGCTTTGGAGGCAAATGTAAATACATGACATCCAACTTTCTGTAAATGGATTTTTTTGTACCTCAACACCCCCCCCCCCGGAAAAAACATCACAGAGATGCAGCAGCAGTGACTATTTTTGTCCGTCTGCTCGACGATTTTGACAATTAACTGTCCTGTCTTCCTAGGTTTGTTGTTATTGTGTCTGTTACAAACATTTTTGAGTTGGATTTAACCTAACCGAGGTAATTTATTCTTGTGTTTCACTTCC 5948 44.22 MAGRFDFGSRPNLSVSSPLHAANDVQGSENPIPLSPQWLLPKPGESKHGIGTGENHFSHQPAYGNRMDTMKGSENYEDINDIQKKKEVFRPSLTDSEIGRRDRWHDEERENNSSMRKDRWRDGEKEMGDSRKMDRWNEDSSTRVFRESRRGPSERWSDSNNRDNVHYDQRRESKWNTRWGPDDKETEGFREKRLDSGRDGDLHLDKNLSHVSNYGKNDRDGDHYRPWRSNSSQVRGKGDPPHHQSQTPIKQVPAFSHRGRGDNTPPTFSLGRGIISSGVNPTNSIYSSSNYLGASSEKSGREPYHYKYSRTKLLDVFRTTNLTSQQTPKDGFVPVPTLTLDEPLEPLALCAPTTEEMTFLKGIDKGEIVSSGAPQVSKDGRNSSEFMQTRRTKLSVSPSLGSREDLPHGFVDDYNDDKDDGTTKPGHTNYSEVSTERQVPYHRPQSKIEAIQEHMTHTSSTFKSEAFREDNNAMRKTDEVPVNRESSVKGGTNVHPGSTWDASSLEQPLNTSLPDRRENPNNISSGTPDKGWLQSSKNLNDGWGSNTATPSYPKDNPKWQTGEESIIRRQLSGILDKEQLARKTVQSAPEDLQLHYIDPSGAIQGPFSGADIIQWFEGGYFGLDLPVRPVNAPNDLPFAALGDVMPHLRSKAKPPPGFSGPKQNEFADSLGNASYGSLGKLHTGLNEIDTMRNETRHKHGSTVEAENRFLESLMSGNIGSSPLEKNAFSEGVPGYFGNNSSSLSSLGIDNGNNLFLLAKRMELERQRSLSNPYAFWPGIDATSKVSKPDIGLDDPIQQAKLLSSIIDHSRQTSHSQGADMSAILQGLSDKAPPGINDVAGWSKFAQCAPDPLQSKLDLHHDLNLSSQAPFGFQQQRLQPQPSLTNLLAQATDNPTLTPDKFLPSSLSQDPQLISKLQQQHLLQLHSQVPFSAQQMSLLDKLLLLKQQQKQEEQQQLLQQQQLLSQVLSEHQSRQHFIDPSFGQLQGAPMPIGNASTDPAQVQQSREKFQIGSQKPLNVVTDRAAPFGNMALQVTQGASYNVNLEDPPLALPHQMFGNVVQQKSWTPALSEQLNDTCPNDMLPGSKVAEGSLFPGLTAQSNEDVNLVPKSSDSHTSKALEQIAEDVPRLDATVTSLASDALVEPLPLKTAEISVAIQPAEVHDFEISIPDSVPALKVQEASMPVEKLERDVCKDETSLETELKNVEVQEPRKSSDKKTKKQKSSKLLSSDQAKDSKSSAIQQLKQSKSGKSENDLKLKADNIVGKSSDTSSSPRKIRDGDGKTSVVDSQPVQSSASAINTWNDGETIQMKDDARLVGSDSVLNSQTQSGQRAWKVASSFKPKSLLEIQEEEQKRAHTETAVSDISTSINSMSLSTPWAGIVSSSDPKTSREIHKDSGISESSEKHENLLTSRSRKSQLHDLLAEDDMEKSTAGDVRVSDSVQIASSPRVMATQAEPLDDNFIEAKDTKKSRKKSAKAKGVGTKATPAVPSADVVASSPIEKGKISRQTQQEKEAMPAIPSGPSFGDFVLWKGETANVAPPPAWSSDSGKVPKPTSLRDIQKEQGRKISAAQHSHQNPTPQKAQPTQAGRSSSTSTPSWALSASSPSKAASSPLQNIPTQSKHGGDDDLFWGPIEAKQENQQVDVRLGSHGSWGNRSASAKAVASTGLLSRQKSSGGKADYLSSSPAQSSQKGKQDPVTKHSEAMGFRDWCESECVRLIGTKDTSFLEFCLKQSRSEAELFLIENLGSYDPDHDFIDQFLNYKELLPADVLEIAFQSRNDRKVSAIASREVNSGNAGGDVDPDVPLGRDGSAKSGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED 1848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6235161 6244166 + XM_039029468.1 Bhi04g00258 31867

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 375 399 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 468 483 - -
Bhi04g00258 1848 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1848 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1662 1693 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1284 1305 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 426 441 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1434 1448 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 371 443 - -
Bhi04g00258 1848 Gene3D - 579 660 IPR035445 -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 455 559 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1662 1699 - -
Bhi04g00258 1848 Coils Coil 949 969 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1568 1620 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1 263 - -
Bhi04g00258 1848 SMART gyf_5 592 647 IPR003169 GO:0005515
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1229 1247 - -
Bhi04g00258 1848 Pfam GYF domain 595 632 IPR003169 GO:0005515
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1348 1367 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1201 1305 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 10 33 - -
Bhi04g00258 1848 CDD GYF 591 648 IPR003169 GO:0005515
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 486 559 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 406 425 - -
Bhi04g00258 1848 SUPERFAMILY GYF domain 583 648 IPR035445 -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1374 1635 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1386 1432 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1790 1825 - -
Bhi04g00258 1848 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1848 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 1201 1228 - -
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 227 252 - -
Bhi04g00258 1848 ProSiteProfiles GYF domain profile. 591 642 IPR003169 GO:0005515
Bhi04g00258 1848 MobiDBLite consensus disorder prediction 71 226 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00258 - - - cmo:103487961 3138.21
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00258 Bhi-Chr4:6235161 Bhi12g02417 Bhi-Chr12:76319508 2.16E-18 dispersed
Bhi04g00258 Bhi-Chr4:6235161 Bhi04g00259 Bhi-Chr4:6235161 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g930 Blo01g01558 . Bda01g00536 Bda03g00257 Bpe02g00397 Bpe04g00211 Bma04g00206 Bma01g02315 Cmo05g00241 Cmo12g00428 . . . Car12g00452 Sed11g1026 . Cpe07g00430 Bhi04g00258 Tan02g1949 Cmetu03g2269 . . . Lcy13g1995 Cla08g01498 Cam08g1988 Cec08g1563 Cco08g1700 Clacu08g1678 . Cre08g1461 Cone4ag1904 Cone7ag1818 . . . . . Cme03g01966 . . . . . . . . . . . Cma12g00478 Cma05g00232 Car05g00194 . Cpe11g00193 . . . . . . . . . . . . . . . Lsi08g01403 Csa02g02043 Chy03g01470 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004078 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00258 Bhi_Chr04 FPKM 8.459974 12.160133 10.972692 11.898164 6.97299 6.015594 6.73174 15.180814 14.693904 16.752323