Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00265 TGACTAAAAAAAGTGGGAAAAAAAGAAAAGAACCCACAAATTTTTAAATTTCTGTCTCTTTCTTCAACCTCTGTCCCTCTCTCTTGTTGCTCTCAAGTGTGAACTGTGAAGTGGCCGCCGTCTCGAAGGACCACGGATTCCCGGCCACAAATCCGACGACGAGTTGATTTTGATATATTTACGTAAAACTCAAACCAGATAATGCTCTGTACATCTCCAAGCAGTCCGATTTTCATTTCTTCTCCAGCTATAATTTTCTGAATCGAAAAAAATTAGGGCTCGAAATCATCTTCAATGGTATCAGCAGAGAATAATTCTCAATCGGCGACGGTTGCCACATCTTCCTCGCCGGGAGTTGAAATCGAGATCATGGATACCGTGACTCCAGCGAAGAAGAAGCGGAATCTCCCAGGGATGCCAGATCCAGCGGCGGAGGTAATAGCTCTGTCGCCAAAATCGCTTCTAGCAACGAACCGATTCGTGTGCGAGATCTGCAACAAAGGATTCCAACGAGACCAGAACCTGCAGCTTCACCGGCGCGGACATAACTTACCTTGGAAGCTCCGGCAACGGACGAGCAATGAAATTCGAAAACGAGTCTACGTCTGTCCAGAGCCTTCTTGCGTACATCATAATCCGGCTAGGGCACTGGGCGACCTAACTGGCATTAAAAAGCACTTCTCCAGAAAGCACTGCGAGAAGAAGTGGAAGTGCGAGCGATGCTCGAAGAAATACGCCGTTCAATCGGATTGGAAAGCGCATATGAAAACATGCGGAACTAGAGAATATAAATGCGATTGCGGAACTTTGTTTTCTAGGAGAGATAGTTTCATCACGCATCGGGCTTTTTGTGATGCTTTGGCGTTCGCAAGCTCGGATTCCAATGTAGTCGCCGCCGCTGCCGCCGCCGTGGCGGTTGCTTCATCGCCATTGGCTACCGTGCCGCTGTCTCCTGCTTTGTCAATTCAAAGCTCAGAAGCACCGGACATTCCCATGGGACCTCCTCCATTAACACCGGCAGTGACAAGTTTAACTTCGGCCATGGCCTCCAACGTTAACAAATTCAACCCAACAAACGGCGGTGGTACAAGTGTTTTCGCGGGTGTATTTACTTCTTCTCCTCCCATTGTTACCAGTGCTGCTGCCCCAAATCCGCCCCATCAACTCACCACCGCCGTCAGCCGATCAGAAGACGGCAATGATTGCCCAACCGCCGCCATTGAGCCCACATCGCTCTCTCTCTCAACGTCCCTTTTCCTCTCCTGTAGAGCCTCAGCCTCATCGGGCTCAACCTCAGCCTCTTCCATTTTTCAAGACCATCCTTCACATTACTCGCCGTCGCCACAGCCCGCCGCCATGTCCGCAACCGCACTGCTCCAAAAGGCTGCCCAAATGGGCGTCACCAGCTCTAACGCCTCCTCTTTACTTCGTGCCTCCGGGCTGTCACTATCACCATCTCCCGGCCCCGCCATCTCCATGACGGCTGGGCTCGGACTTGGATTTGGTAACGAGCCCACCACGCGGGACCTCCTAGGATTGGGCATGGGCGGCGGCGAAGGTGGTGGAGGCGGGGTTTCCGGCGGAGGTCTATCTGCTCTTTTCGTCTCCTTTGATGGCTGTGACGTTGAAGCTGCTTCGCCTTACGGCGGCGGCGGGACTAATGGGTTATGAAATTTGACCTTCTGCTCCGCCGGTTTCTGCATCGGGTTCCGGTAATGTATGTGTATAGAAGAAGGAAGCATGCAGCCACCTGGTTACGACGTGGGTCGACATTTCGCAACAGGGAAGAGATTGTACAATCTTTGTTTTCTTTTTCTTTTTTTCCCCCTCTTTTTTAAGTGATGTTATTATAATTTCTAATTTTGCTTCGTTTATTTTTAATTAGTGTTTTATTTTCTCATTCGGGAGTTTGATTAAATTCTTTTCCCATTCTTCATATTAATTTTGGAGCTGATTGTACATATTAGTTCGAGTTCTTTATTTTA 1985 49.27 MVSAENNSQSATVATSSSPGVEIEIMDTVTPAKKKRNLPGMPDPAAEVIALSPKSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSNEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHCEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAFASSDSNVVAAAAAAVAVASSPLATVPLSPALSIQSSEAPDIPMGPPPLTPAVTSLTSAMASNVNKFNPTNGGGTSVFAGVFTSSPPIVTSAAAPNPPHQLTTAVSRSEDGNDCPTAAIEPTSLSLSTSLFLSCRASASSGSTSASSIFQDHPSHYSPSPQPAAMSATALLQKAAQMGVTSSNASSLLRASGLSLSPSPGPAISMTAGLGLGFGNEPTTRDLLGLGMGGGEGGGGGVSGGGLSALFVSFDGCDVEAASPYGGGGTNGL 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6358825 6362244 + XM_039030522.1 Bhi04g00265 31874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00265 458 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Bhi04g00265 458 SMART c2h2final6 138 158 IPR013087 -
Bhi04g00265 458 SMART c2h2final6 103 133 IPR013087 -
Bhi04g00265 458 SMART c2h2final6 62 84 IPR013087 -
Bhi04g00265 458 Gene3D Classic Zinc Finger 117 193 - -
Bhi04g00265 458 MobiDBLite consensus disorder prediction 279 307 - -
Bhi04g00265 458 SUPERFAMILY beta-beta-alpha zinc fingers 61 159 IPR036236 -
Bhi04g00265 458 MobiDBLite consensus disorder prediction 279 300 - -
Bhi04g00265 458 MobiDBLite consensus disorder prediction 333 353 - -
Bhi04g00265 458 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 84 IPR013087 -
Bhi04g00265 458 Pfam Zinc-finger of C2H2 type 62 84 - -
Bhi04g00265 458 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 4 436 - -
Bhi04g00265 458 Gene3D Classic Zinc Finger 62 105 - -
Bhi04g00265 458 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 4 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01276 Bhi-Chr3:26369233 Bhi04g00265 Bhi-Chr4:6358825 1.40E-126 dispersed
Bhi04g00265 Bhi-Chr4:6358825 Bhi01g02708 Bhi-Chr1:67089612 6.98E-110 dispersed
Bhi04g00265 Bhi-Chr4:6358825 Bhi03g01682 Bhi-Chr3:35372763 1.97E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
847 PF12874 zf-met 0.0032 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00265 K25869 - csv:101217471 722.235