Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00271 CCACCCTGAAAATTCTCCATTTCTTCCGTCCACTTTAATACCCAAACTCCTTCGCCACTTCTTCCAATAATCCAAACCCCCACTCCCGTTTTCCATTTCCCGCCAGACTCACTCTCCCCACGCCATTATCTCCGCCGATCGCGGATTATGACCTCCGACGGCGCCACTTCTGCCTCCAATTGCCGGCGGAAGCCGTCTTGGAGGGAACGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCTGCTAAGATTTACTCTGGACTTAGGGCTCAGGGCAACTTCAATTTGCCTAAACACTGCGACAATAACGAGGTCCTTAAGGCCCTCTGTGCTGAAGCTGGTTGGACTGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCAATTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCATCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCATCCCACTTCGACGCCAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCGCTTCCTCCTCTAAGAATCTCAAATAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGGACTCCACAGCCATTCCCCAATTGGGAAGTCACTGCTAAAGAATCCTTGTCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGCCCTCAGATCCATACTCCCGCCACGATTCACAAATGTGACGAATCTGAATCATCTACCAATGATTCTAGTCAATGGGCACTTCTCCGTGCCTATGCGCCTTCTGCATCGACAATGCCAACATCTCCCACGTTCAATCTTGTGAAACCTGCTGACCAACATGCTCTACATGGTGGTTTCATCAAAGAAAATGGAAGAGGAAATGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATCCACGATGTCGGATTGGAGGATTTAGAGCTCACACTTGGTAGCAGTAAGGCTCGGAGCTAAATGGAAGAAGAAATGGTCTACAAACATAACAATAGTAAGAAACCCTCTTTTGATTGATTCATGGTCTATCTGAAAATGGCATGGCCTGGCTCATTCCATTCAATATTATAAGTTAAAAACTCTACTTTATACAGTGTCTGTCTTTGAGGGAGGGAGCTTCATTCACTTCATTTCAGGCAATGATTTTCCTAGTTTGTTGTTATATTACATTACAGTGCATGTTTTAGGAAATCCCGAGTTTCTAAGATGTTTCAAGTCAGCAATTACTATGTAGATAGATGTAACATATGATGAGAAGGGGTTGTTGATATATTATCATCTTTAAAAACACTGAAAATGCACACATATTGCTCTGTTTTTCCTCATTCAAACTCTGTTTCAATTCAATTCAACCATTTGCCTGCGTTTTGCCATTGGATGGAACTGAAAATGGGGGGCCATGAGAGCTGGTTGATTGTGCTTATGGCAATGTCCGACAAGCTCCATGTTCAACCACACACTTTTAATAAATACATTTGGCAATGTAATAAAAGACGAGAAAGTTTTGTCCTTGCA 1638 45.67 MTSDGATSASNCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGNSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSHFDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSSLNYPFFAVSAPASPTRPQIHTPATIHKCDESESSTNDSSQWALLRAYAPSASTMPTSPTFNLVKPADQHALHGGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSSKARS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6478640 6480626 - XM_039028790.1 Bhi04g00271 31880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00271 311 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 310 - -
Bhi04g00271 311 MobiDBLite consensus disorder prediction 1 30 - -
Bhi04g00271 311 MobiDBLite consensus disorder prediction 14 30 - -
Bhi04g00271 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bhi04g00271 311 MobiDBLite consensus disorder prediction 93 132 - -
Bhi04g00271 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01260 Bhi-Chr3:25803108 Bhi04g00271 Bhi-Chr4:6478640 1.03E-99 dispersed
Bhi04g00271 Bhi-Chr4:6478640 Bhi08g02144 Bhi-Chr8:61597389 1.83E-41 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
848 PF05687 BES1_N 1.10E-61 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00271 K14503 - csv:101219853 542.732