Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g00282 | GTGAATATTGTTTAGGGCACACGGCTGCGAGAAGCTTCCATTTTCAAACGTATATGTTTCGTTTTTCCGTCAAACGCGTTCGTCTCCAGTTTTTAGATTTGCTTTTTGATCCATATCGGAACGCAGGATCGGCCGGTTTGTTCTTCTTAATCACTAGGTGGGGTGTGTAGATATGGCGAGCGGGTTTGGGGAATCGACAAGTAGGCAACCTCAAAGCCCTTCTTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGCAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGTGGTCATCTTTTCTGTTGGCCATGCCTTTATAAGTGGCTGCATATTCATTCCCATCCCCAGGAATGTCCAGTTTGCAAGGCTATCATAGAAGAGCAAAAATTGGTTCCTTTATATGGTAGGGGTAAGACATCGACTGACCCAAGATCAAAAAGTATTCCTGGAATTAACATTCCTAATCGGCCTGCGGGACAGAGACCCGAAGCAGCAGGTCCTCCTCCAGAACCAAATCCTTTTCCTCACAATGGGTTTGGATTCATGGGAGGTCTTGGAGGGTTTGCTCCAATGGCGTCGACGAGGTTTGGCAATTTCACGTTGTCTGCAGCTTTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATACGCAGATCCAAGCATGTACGGTGCAGGTGCTAACTTTCCATACGGGTTTCCTAACATGTTTCATGGTAGCCATGGTCACGCCCATGGATACTATCACCAGCTCCGTCAAGGTCAGCAAGATTATTATCTGAAGCGGCTGCTTTTGTTTATTGGTTTTTGTGTTCTTCTTGCCCTAATCTGGCAATAGATGAAAGGGTCCATTAGGGCTTATATTGCTTCGTGGTGTTTAGTGTATTCAACCTCTAATGTAAGAATTGAAAGGGGGAAAAAAACAACTGGTACATGGTCAAAAAAAAAAAAAAAAAAAAAAAAGAATCTGCTGGTACATTGTCTTGATATCTCATCATTCGTCCTGATTAGTCTTACTGTATGTTGAATGGACACCAACTTTCTATGCTTAGGCATGGTGAACATCAGCTGACATGCTTATGCAATTGTATTTGGAAGTTTCCATTTATGCATATATATAATACACACACATTTATTTGCTGACCA | 1173 | 42.37 | MASGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGANFPYGFPNMFHGSHGHAHGYYHQLRQGQQDYYLKRLLLFIGFCVLLALIWQ | 230 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6667926 | 6669424 | + | XM_039028095.1 | Bhi04g00282 | 31891 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g00282 | 230 | SUPERFAMILY | RING/U-box | 26 | 83 | - | - | |
Bhi04g00282 | 230 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bhi04g00282 | 230 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 2 | 230 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Bhi04g00282 | 230 | CDD | RING-HC_AtRMA_like | 28 | 72 | - | - | |
Bhi04g00282 | 230 | MobiDBLite | consensus disorder prediction | 84 | 122 | - | - | |
Bhi04g00282 | 230 | ProSitePatterns | Zinc finger RING-type signature. | 45 | 54 | IPR017907 | - | |
Bhi04g00282 | 230 | ProSiteProfiles | Zinc finger RING-type profile. | 30 | 71 | IPR001841 | - | |
Bhi04g00282 | 230 | Pfam | Zinc finger, C3HC4 type (RING finger) | 29 | 70 | - | - | |
Bhi04g00282 | 230 | SMART | ring_2 | 30 | 70 | IPR001841 | - | |
Bhi04g00282 | 230 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 9 | 84 | IPR013083 | - | |
Bhi04g00282 | 230 | PANTHER | OS12G0636000 PROTEIN | 2 | 230 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g00282 | Bhi-Chr4:6667926 | Bhi05g01871 | Bhi-Chr5:58791094 | 3.84E-33 | dispersed | |
Bhi11g01428 | Bhi-Chr11:41410293 | Bhi04g00282 | Bhi-Chr4:6667926 | 1.13E-22 | transposed | |
Bhi03g01959 | Bhi-Chr3:41436736 | Bhi04g00282 | Bhi-Chr4:6667926 | 8.03E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g00282 | K10666 | - | csv:101221027 | 426.017 |