Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00331 ACAGAGAATGAAATAGGGTGGAGACGAACTGTGGACGTCTCTAATAAATTCCCACAATAACCAAATAAAGATTATAGATATACAAGTGATGAACAATATCTCCATTAGTTTAGAGAAGCTTGACAGACCAAATAAACAATGAGTTCAAATGTGAGGGGGCAAAAGCGTAATTTACTCTATCCTTTCCTTCAAATTACTGTACATTTATAAATAATACTTTCCTCCGGCTATTTTTTCAAAACAGTGGGAAGTTAACGGTCGACTATCAATCAATTATCCGTACGAAATCGAAATTTCCCCAATTCCGAAATATACTGATATCTCGTCGTTTCTGCTATTCGGCTATTCGGCAAACCCTACGAAGCGAGGAAGAAGAAGAAGAAGAGAACATGGGGATCTCTAACCTCTCATACGAGGAATGTCGTCGCAAAAGAGTTGAAGAAAACAAGAAGAGAATGGAAGCCCTAAATTTGCCCTTGCTTTCTCAAGCTCTCCTGGACTCTTCCCCTTCCAAGTCTTCCTCCCCTAGTAAGCTCACCAAGCCTCGCGTCACTCAGAAACAACTCGTGGTGGTGAGGAGGTCCAGTCGCGTGGCGAAACAGCCAACCCCTGTTTACGCTGAAGTTCTTGTTGATCGTGTGGTGATTCCTAGAAGAGCAAGAGATTTTCCGGAGCAGTTTTATGCTTCGGATGAAGCAAGAAAAAATGCCTTCGAAAGAGCTCTCGAGTTACATTCTGGATTGGAGCCAAATTATCCCATCTGTATAAAGTCAATGGTTCGATCTCATGTTAGTGGTTGTTTCTGGCTGGGCCTTCCTGCTCATTTCTGCAAGACCCACCTTCCAAAGAATGATGGAGTAATGACTTTAATAGATGAAGATGGTGATGAGTATCCAATAATATATTTGGCACGAAAAACAGGATTTAGTGGGGGATGGAAGGGTTTTTCAATTGCTCATAAGTTATCAGATGGAGATGCTGTGGTTTTTCAACGCATTAAACCTACAGCCTGCAAGGTGTACATCTTTAGGGCGAATGGTTCCAAAGAAGATAGTGATTCTAACAGTAGCTAAATGATTTACTTTCTTATCCCAAGTCAGTTCATTTCAGGTGAGAATTGAAGAGGCCTGGGGAAGGGCACATAATGCAACAACATTTTTCAGAATTGGTTTTGGAATAAAAGGCAATATGTGTCTTGTACAATCTTGTGTCAGCTGAATATGACTATTATGTTGGGGATCAACAAAATCTATAGCTTACACAGGGGCTCATCCCACTGGAAACCCCTCAGGGTATAACTAACTTATTTTCTTAGTAAATTTGATGTAATAGTTATTTTGAATGTTCAGGGTATAAATTAAATCTGAGACCATGGAGACATAATTAAAACGTACCTTAAAA 1401 40.04 MGISNLSYEECRRKRVEENKKRMEALNLPLLSQALLDSSPSKSSSPSKLTKPRVTQKQLVVVRRSSRVAKQPTPVYAEVLVDRVVIPRRARDFPEQFYASDEARKNAFERALELHSGLEPNYPICIKSMVRSHVSGCFWLGLPAHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQRIKPTACKVYIFRANGSKEDSDSNSS 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7643918 7646972 + XM_039029751.1 Bhi04g00331 31940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00331 227 PANTHER B3 DOMAIN-CONTAINING PROTEIN 1 220 - -
Bhi04g00331 227 ProSiteProfiles B3 DNA-binding domain profile. 125 216 IPR003340 GO:0003677
Bhi04g00331 227 Gene3D - 100 217 IPR015300 -
Bhi04g00331 227 CDD B3_DNA 123 214 IPR003340 GO:0003677
Bhi04g00331 227 SUPERFAMILY DNA-binding pseudobarrel domain 119 217 IPR015300 -
Bhi04g00331 227 MobiDBLite consensus disorder prediction 37 56 - -
Bhi04g00331 227 Pfam B3 DNA binding domain 126 215 IPR003340 GO:0003677
Bhi04g00331 227 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 1 220 IPR044837 -
Bhi04g00331 227 SMART B3_2 125 216 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00331 Bhi-Chr4:7643918 Bhi05g01128 Bhi-Chr5:40633506 7.58E-69 dispersed
Bhi04g00330 Bhi-Chr4:7643916 Bhi04g00331 Bhi-Chr4:7643918 6.54E-172 tandem
Bhi04g00331 Bhi-Chr4:7643918 Bhi04g00332 Bhi-Chr4:7665698 1.22E-132 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
857 PF02362 B3 7.90E-13 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00331 - - csv:101205473 337.421