Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00332 ATAACGAAGCTCCGTCCTCTCTGCTATTCATCTTCTCCCTATTTCCATTTCGCACAGAGACCAAACCCTACGAACCGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGATATGGGGATCGCAAACCTTTCATATGAGGAATGTCGTCGCAAGAGGGTCGAAGAAAACAAGAAGCGAATGGAAGCCCTAAATTTGCCCTTGCTTTCTCAAGCTCTCATCGATTCTTCCCCTTCCAAGTCCTCACCTAGTAAGCTCACCAAGCCTCGCGTGACTCAGAAACAACTTGTGGTAGTGAGGAGGTCCAGTCGTGTAGCGAAACAGTCAGCTCCTGTTTACGCCGAAGTTGTTGTAAATCGCGTGGTGATTCCTAGAAGGACTTCTAAATTTAGAGATTTTTCAAATCGGGTTTATGCATCGGATGACGCAAGAAAAAATGCTTTTGAAAGAGCTGAACAACTTCAATCTGGGTTGGATCCGAATTATCCCAACTTTATCAAGTCAATGCTTCAGTCTCATGTTAGTGGTGGATTTTGGCTGGGCCTTCCTTCTCATTTCTGCAAGATTCACCTTCCAAATCGTGATGGAGTAATGACTTTAATAGATGAAGATGGTGACGAGTATCCAACAATATATTTAGCACGAAAAACAGGACTTAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAGTTGGCAGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAACATGCAAGGTGTACATTCTTAGGGCGAATAGTTCCAGAGAAGATAGTGATTCTAACAGTAGCTAAATGATTGACATTTCTTTTCCTAGCTCAGGTAAGAGATAGCCTAATAGGAAGTGCACATAATGCAACTACTTTTGTCATCTTGGTTTTGGAGTAAAAAGTAATCTGTCTTGTACAATCTGTGTCTATGAAAAAAAATGAAAGCACTATGTGATGGTGATTGTCTGTTGTAGTAGTGTGGGGTGTATTTATATCTGTCCTGTACTCATCTTCTTCTCTTCTTTTATTTTCTCCCCCAATCCCTTTTTATTAGCTCAGGCTACAGTTCTAGCTGAAAGATTTAACTAATTTTGAAAGAGCAAGCCTCCAGGTTCAAAGTGGATGAGGTGATGCTGTAAGCTTATGAACTAAAAGTTCTCAAACAAAGTCACTCTTTTCTCTCT 1179 40.8 MGIANLSYEECRRKRVEENKKRMEALNLPLLSQALIDSSPSKSSPSKLTKPRVTQKQLVVVRRSSRVAKQSAPVYAEVVVNRVVIPRRTSKFRDFSNRVYASDDARKNAFERAEQLQSGLDPNYPNFIKSMLQSHVSGGFWLGLPSHFCKIHLPNRDGVMTLIDEDGDEYPTIYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKVYILRANSSREDSDSNSS 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7665698 7668677 + XM_039029762.1 Bhi04g00332 31941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00332 229 SMART B3_2 127 218 IPR003340 GO:0003677
Bhi04g00332 229 CDD B3_DNA 125 216 IPR003340 GO:0003677
Bhi04g00332 229 PANTHER B3 DOMAIN-CONTAINING PROTEIN 2 222 - -
Bhi04g00332 229 SUPERFAMILY DNA-binding pseudobarrel domain 120 218 IPR015300 -
Bhi04g00332 229 Pfam B3 DNA binding domain 127 217 IPR003340 GO:0003677
Bhi04g00332 229 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 2 222 IPR044837 -
Bhi04g00332 229 Gene3D - 102 219 IPR015300 -
Bhi04g00332 229 ProSiteProfiles B3 DNA-binding domain profile. 127 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00330 Bhi-Chr4:7643916 Bhi04g00332 Bhi-Chr4:7665698 1.22E-132 dispersed
Bhi04g00332 Bhi-Chr4:7665698 Bhi05g01128 Bhi-Chr5:40633506 1.24E-76 dispersed
Bhi04g00331 Bhi-Chr4:7643918 Bhi04g00332 Bhi-Chr4:7665698 1.22E-132 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
858 PF02362 B3 1.10E-12 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00332 - - csv:101205473 396.356