Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00353 TGATCTCTCTGAGAAACCTTCGATTTCCGATTTTCGATTTTCGATTTTTTCTAATTTGTGTCGAAAAGTTGGAAATGATTAAAATGCTTGAAAGATTCCAGTAAATTGTGAGGAAAACGATGGCGTAGATCCCACTCAATTCCCTAGAAAGGGAAAAATTAAAAAATTAAAAACCCTAAGAAGAAAATAAAAAGAAATAGAAATTTTCTTAAACATCATTTCGAAACCCCACAGCCAAATCGTATAAATATATAGGACAGCCTTGCAACCCATATATATGTGTGTATATATTATGTGTGCCAGTTCATAGTTCATTCTTTTTAATATCTGTTTTCCTCCTTAGTTCTTCCCCCAGATCTCTCTCTCTCTCTTTCTTGAACTGCGCGATAAAGAAGGTTCTTCTACTTGTATAGATTCATCGATTTTAGGCGAATGGAAGCTTACCGATTCAATTGAAGTTGATTTTGTTCAAAGCGGAGCAAAATGGACGGTGCTGATGGGACTGTGAGGCTTGGGGCTGTGAACTTGAAGCCGGATCGGAGTGCGTTTGATTTTGGCCCTGATGTCTCTGTTTCGTCTCCGGTGACAAGGCAGAAAGCCGCTGCTGCTAAACAGTTCATTGAGAATCATTACAAGAACTATCTCCAAGGTCTTCAGGATCGCAAAGACAGACGGAGAACGCTTCAACGAAGAGCGCAAGAAGCTCAGATCTCGGCTGAAGAACAAGAAGAGATGCTGAGGAACTTGGAACGCCGAGAAACAGAATTTATGAGACTGCAAAGACGAAAAGTTGGAATCGATGACTTTGAACAATTAACTGTTATCGGTAAAGGTGCATTCGGCGAGGTTAGATTGTGTCGTGCAAAAGGAACTGGGGAAATTTTTGCTATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCTGAGAGGAATTTACTTGCAGAGGTTGATAGTCGGTGCATTGTAAAACTCTTTTATTCTTTTCAAGATTCTGAATTCTTATACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACATTGCTAATGAGAGAAGACATTCTGTCAGAGGATGTTGCTCGCTTTTACATGGCAGAGAGCATTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAAAATGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTAAATGACGAAGACTTAAATGCCCAGCAGGCCAGAAATGAAGGTCAAGGTCATACTGACTCGAACGGATCCCATTGGATGATGCCAAAAGAACAAATTCAACAGTGGAAGCGTAATCGTCGTGCATTGGCATTTTCAACAGTTGGGACCCTGGATTATATGGCACCTGAAGTACTGCTTAAGAAAGGGTATGGAATGGAGTGTGATTGGTGGTCCTTAGGGGCCATTATGTATGAGATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACTTTTCGCAAGATAATAAATTGGAGAACTTGCCTGAAATTTCCCGAGGAACCAAAAATCTCGGAGGAAGCTAAGGACCTGATCAGCCACTTGCTTTGTGATGTTGAAACAAGGTTGGGAACACGAGGAGTAGAGGAAATAAAGGCACATCCATGGTTCAAAGGCATTCAGTGGGATAAGCTGTATGAAATGGAAGCTGCATACAAACCAACTGTCACTGGAGAACTAGACACTCAGAACTTTGAGAAGTTTCCTGAAGTTCAAGACCCTCCCTCAGAAATGCCAACTGTTGGACCTTGGAGGAAGATGCTAACATCAAAAGATACTAATTTCATTGGATTTACTTTTAAGAAGTCAAACGTCAAATCACTTGAGAGTACAGGTACAGATTTGCATTCAAACACATCATCAAAGACTCCATCTCTAGTTTCCTTGTTGGGTCGAATAGACTTGCAAGAAACTGTGATACCAGAAGTTGAACAAAAACAGGATGCATGAGTCTTTGTTCTTCTGTTGCCCACAGTTTGGTATATGAAGATGATAAGGACATGAAGGTTATCACTTTTTAAAACAGCAAAGATAGTTTGCTTCCCTTTTGGATAATTATTATATTTCATTAAAACTGTAAAGCAAAATAAGCATCGAGTTCAATAGGATCAATTTTTCTTCTTGACATCATGATTCCCATTATTTTCTTTAAACATTATTGTAATCATTTGGTGAATTGATGCAATTTTGTCGGTTAAAGTTGATCTAATGCTTGTTCATGTTAA 2330 39.1 MDGADGTVRLGAVNLKPDRSAFDFGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRTLQRRAQEAQISAEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYMAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLNAQQARNEGQGHTDSNGSHWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEEAKDLISHLLCDVETRLGTRGVEEIKAHPWFKGIQWDKLYEMEAAYKPTVTGELDTQNFEKFPEVQDPPSEMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLESTGTDLHSNTSSKTPSLVSLLGRIDLQETVIPEVEQKQDA 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8454494 8459970 - XM_039029492.1 Bhi04g00353 31962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00353 523 Coils Coil 57 101 - -
Bhi04g00353 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Bhi04g00353 523 SUPERFAMILY Protein kinase-like (PK-like) 85 463 IPR011009 -
Bhi04g00353 523 CDD STKc_NDR_like 106 475 - -
Bhi04g00353 523 SMART pkinase_C_6 412 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bhi04g00353 523 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Bhi04g00353 523 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Bhi04g00353 523 ProSiteProfiles Protein kinase domain profile. 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00353 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bhi04g00353 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 509 - -
Bhi04g00353 523 Gene3D Phosphorylase Kinase; domain 1 79 191 - -
Bhi04g00353 523 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Bhi04g00353 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 509 - -
Bhi04g00353 523 Pfam Protein kinase domain 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00353 523 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bhi04g00353 523 Gene3D Transferase(Phosphotransferase) domain 1 310 429 - -
Bhi04g00353 523 SMART serkin_6 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00353 Bhi-Chr4:8454494 Bhi12g01610 Bhi-Chr12:52141734 0 dispersed
Bhi04g00353 Bhi-Chr4:8454494 Bhi09g03123 Bhi-Chr9:80041640 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87655 PF00069 Pkinase 2.40E-65 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00353 K08790 - csv:101222805 1003.05