Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00375 TTTGGGTCTATGAGGTGTGAAAATCTTTGTGTGTTGTGTGTATATAATAAGAGGTGGTGGGTTTGATCCGATTCTTGACCATGGTATTAAGTATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAGCCCTCCCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCCCCTAAACTTCAACATCAAAACCATCAACCCACCTCCGATAACACCACCGTCACCACCACTACCACCACCACGCTCACCTCTTTCGACCTCAAGACCTTCATCAAACCCGATTGCGGCCCCCGAAAACTCGGTTCCTCCCATGATCATAATAAAGATTCTTCCTCCTCCTCTTCTTCCCTCCAGACAGGAGTTGAAACTCATCCAGGAGGGACACGGTGGAATCCAACCCAAGAACAGATAGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAGCAAATTGAACACATCACTGCCCAGCTTGGCAACTACGGCAAGATCGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAGCGACAAAAACAAAAACGCAACAGTCTTGGTCTTCCACACTCTCCCAGAACTCCTCCCCCTCCTCCCATCATCCCGGCCTTCCACACGGGAGAAGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGGTTTGAGTGTTTGGTAGAAGATAATGGTATAATGTGTAAAAAGGAGGATGGTGATCATGATAGGACTCTGGAGTTATTCCCCTTGCATCCAGAACGTTGATGATCCAATTTTTGGAAATTTTAAAAAGAAAAATGCGTCTTATGCTATGATCATAAGTTGTTATGAATTAATCCGCTTTAAATTTCCTCTCTTTTCTCTCATTTCGAGAAAGAAAGAAAGGAAAAAGAAAAGTTCGAACAACAACTAGTACTATTCTATACTCATGTATGACGTACTTCCAATTTCCTCTCTTTTA 984 43.8 MVLSMKVHQFARGFWDEPSLSLGCKRLRPLAPKLQHQNHQPTSDNTTVTTTTTTTLTSFDLKTFIKPDCGPRKLGSSHDHNKDSSSSSSSLQTGVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGIMCKKEDGDHDRTLELFPLHPER 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9164651 9165804 - XM_039029745.1 Bhi04g00375 31984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00375 235 CDD homeodomain 102 163 IPR001356 GO:0003677
Bhi04g00375 235 SUPERFAMILY Homeodomain-like 98 168 IPR009057 -
Bhi04g00375 235 MobiDBLite consensus disorder prediction 159 189 - -
Bhi04g00375 235 Gene3D - 101 168 - -
Bhi04g00375 235 ProSiteProfiles 'Homeobox' domain profile. 97 162 IPR001356 GO:0003677
Bhi04g00375 235 SMART HOX_1 99 166 IPR001356 GO:0003677
Bhi04g00375 235 MobiDBLite consensus disorder prediction 70 108 - -
Bhi04g00375 235 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 234 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bhi04g00375 235 Pfam Homeodomain 102 161 IPR001356 GO:0003677
Bhi04g00375 235 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00375 Bhi-Chr4:9164651 Bhi08g01290 Bhi-Chr8:39357629 4.59E-28 dispersed
Bhi04g00375 Bhi-Chr4:9164651 Bhi02g00135 Bhi-Chr2:2560364 4.16E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
863 PF00046 Homeodomain 1.00E-18 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00375 - - csv:101204222 404.06