Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00381 AATATTACTTGTGAATTGTGATTGAGCAGTAGATAGAAGCCCATAGCGGCAGCTCCTAAAACCTACCAATAAAGACTCTTCCTTTCCCCTCTCCTTCTCTCTCTCTCTCTCTCTTCTTCACTCTGAATTTAGATAAAGAGAAAGCGAGAAACCGCAGCTCACAGCCATGGGAGAGGATTGGTTTTCTTCCACACTTTCCTCTGTTTTCTCCATTTCCTTCTCTCACGCCCTACAATGAACCAAAATCTCAACCTCTTCTTCTCAGAAGAAGATGGTACTACCGTATACGCTTGATGCTCTTTATTGCTCAGAGGACCACTGGGAAGACGACGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACGGGTTTTGATAAGCAACCTTACTCTAATCTAACAACCGAATCTAGTTCTCCGATTCTAGCAGTGGCAGAGCAGGACCTGTTTTGGGAAAACGATGAACTAATTTCTCTGTTTTCGAGAGAGAAGCCTAATGAACTGTTTAAAACCATTCAGATTGACCCTTCTCTTGCTTCCGCCCGACGAAGCGCCGTCGAGTGGATGTTGAAGGTTAATGCTCATTACTCTTTCTCTGCTCTCACTGCGGTTCTCGCTGTCGATTACTTGGATCGGTTCCTGTCCTGTTTTCATTTTCAAAGAGATAAGCCATGGATGTCTCAGCTTGCTGCTGTTGCTTGCATCTCTCTTGCTGCCAAAGTAGAGGAGACCCAAGTCCCTCTTTTATTGGACCTACAAGTGGAAGACAGTAGATATCTGTTTGAAGCCAAGACCATTAAGAAAATGGAGCTTCTTGTGCTCTCTACGCTTCAATGGCGGATGAATCCCGTTACCCCATTTTCTTTTGTGGATTATATCTCAAGGAGGCTTGGATTCAAGGACCATATCTGCTGGGAAATTCTTTGGCAGTGTGAACGAACTATTCTCTCTGTTATTTTAGAGTCAGATTTCATGTCCTTTCTTCCTTCTGTAATGGCCACCGCCACAATGCTGCACGTTTTCAAAGCTATGGAAGAACCCCACCTCAGCGTTGAATACGATTCCCAGCTTCTTAACATCCTCGGAATCGACAAGGGGAATGTTGAAGAATGCTGTAAACTGATCTCAAATGCATCTAGAAGAAACAGCGACGAATTCAAGAAACGTAAATTTGGGTCAATTCCGGGCAGCCCCAACGGCGTAATGGATGTGTCATTCAGCTCTGATAGCTCTAACGACTCGTGGTCAGTGGCTTCGTCGGTTTCATCTTCGCCAGAGCCATTAACGAAGAAGAACAGAGCAAATGGATCGGTCTCAGGAGATTGCGAAAAATTCAGAACCCTCTTTTAATTAACTTCCCTTTCTTCTTTTTCCTCGTAGTCCTTGTATGTTGAATAAGAATGAATCAATATTTTCATCGAATTCTGCAAGTTAAATTGCCTTACCATCTCTGCAGTTGAGGGCCAATGGATGAGCAATCGGAAGTTTAAAACGCAGAGATGGCTGGCATTTTATCTGGATCCAAAGAACATTAGAACTTATAACAATGAAGAGCAGTTTAAGTTGTTTAATTGTTTAATG 1585 42.9 MVLPYTLDALYCSEDHWEDDDEEEEEEEEEEEETGFDKQPYSNLTTESSSPILAVAEQDLFWENDELISLFSREKPNELFKTIQIDPSLASARRSAVEWMLKVNAHYSFSALTAVLAVDYLDRFLSCFHFQRDKPWMSQLAAVACISLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDYISRRLGFKDHICWEILWQCERTILSVILESDFMSFLPSVMATATMLHVFKAMEEPHLSVEYDSQLLNILGIDKGNVEECCKLISNASRRNSDEFKKRKFGSIPGSPNGVMDVSFSSDSSNDSWSVASSVSSSPEPLTKKNRANGSVSGDCEKFRTLF 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9350821 9352749 + XM_039028242.1 Bhi04g00381 31990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00381 360 MobiDBLite consensus disorder prediction 313 351 - -
Bhi04g00381 360 Pfam Cyclin, C-terminal domain 195 320 IPR004367 -
Bhi04g00381 360 SMART cyclin_7 98 186 IPR013763 -
Bhi04g00381 360 Gene3D - 78 193 - -
Bhi04g00381 360 CDD CYCLIN 93 185 IPR013763 -
Bhi04g00381 360 Gene3D - 194 284 - -
Bhi04g00381 360 SUPERFAMILY Cyclin-like 177 307 IPR036915 -
Bhi04g00381 360 SMART Cyclin_C_2 195 321 IPR004367 -
Bhi04g00381 360 Pfam Cyclin, N-terminal domain 84 193 IPR006671 -
Bhi04g00381 360 MobiDBLite consensus disorder prediction 14 35 - -
Bhi04g00381 360 PANTHER CYCLIN D3.1 PROTEIN 39 344 - -
Bhi04g00381 360 MobiDBLite consensus disorder prediction 13 44 - -
Bhi04g00381 360 PANTHER CYCLINS 39 344 IPR039361 -
Bhi04g00381 360 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Bhi04g00381 360 SUPERFAMILY Cyclin-like 64 193 IPR036915 -
Bhi04g00381 360 MobiDBLite consensus disorder prediction 313 347 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00381 Bhi09g03276 CCT
Bhi04g00381 Bhi09g03276 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00381 Bhi-Chr4:9350821 Bhi04g01409 Bhi-Chr4:35696122 9.90E-56 dispersed
Bhi03g01149 Bhi-Chr3:23219008 Bhi04g00381 Bhi-Chr4:9350821 4.59E-54 transposed
Bhi03g00966 Bhi-Chr3:18371412 Bhi04g00381 Bhi-Chr4:9350821 2.85E-82 wgd
Bhi04g00381 Bhi-Chr4:9350821 Bhi05g01092 Bhi-Chr5:39421565 9.27E-86 wgd
Bhi04g00381 Bhi-Chr4:9350821 Bhi09g03276 Bhi-Chr9:83901001 9.02E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00381 K14505 - csv:101205442 575.089