Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00390 GCGCCAAATGGGTTTTCTGCGTTTTTCACTTTTCAAAACACTGCAAAAAAAAAAATGGCGGTCAATCCTTTCCTCATCCCCATTACAAAGTCTCCCCCTCACAACTCCTTCAACTCACCCATTGCTCCTTCGATCTCTCTTTCTCTCTTCCGATTTCAATTTCCGACCATCAATAGCCAAGAGCGAAGGGCTGAGACCAAGATCCAATGGCCGCCACAGAGAACTGTGCCCGTGTCACTCGTGCTTCCAAGAAGAGAGCTGCGACGGCCGCCGTGGTCGAGGGTCAATCAGCTAATAAGAAGCGGGTGGTTCTTGGAGAGCTTTCCAACGTTCAGAATGTTAATGGGTCGGTGGCACCACAGAAGAGAAAGGCCAAGTCCCAGATGACAAAATGCAAGCCTAAGAAGAGAACGAAGACTGGTGTTGCTCCAACGATCAAGAAAGCGGTTGTTTCTGAAGATAATGATCCCAAGTTGACCGTTGATGATATTTTGGACGACCCAGAAATGAAGGGGCCTTATTCCTCGGATATTTATGCTTATCTTAGCAAAATGGAGGCGGAACCAAAAAGAAGACCGATTCCAAATTACATAGAGAAGATTCAGACGGATGTTAGTGCTAATATGAGAGGGGTTTTGGTTGATTGGATGGTAGAGGTAGCAGAGGAATACAAGCTAGGCTCCGATACTTTGTATCTATCCATCTCTTACCTCGATAGGTACCTATCCATGAATATCCTCAGTAGGCAAAGGCTTCAATTGTTGGGGGTTTCTTCAATGCTTATTGCCTCGAAGTATGAAGAAATCACTCCTCCACATGTGGAGGATTTCTGTTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAGGCTGATATTCTCAAGTCTTTGAACTTTGAAATGGGGAATCCTACTGCCAAGACATTCTTAAGGAGGTTCACTAATATTGCTCAAGAAGATTTCAAGATACCAAATCTGCAGTTGGAATTTCTTGGTTATTACCTTGCTGAGCTTAGCTTATTGGACTATAATTTTGTGAAGTTCTTGCCTTCTATGGTTGCTGCTTCAGTCGTATTTCTTGCAAAATTTATCATCCGACCGAAGCTGCATCCTTGGGGTCCAAATATGCAACAATACACTGGCTACAAGCCAGCTGATCTAAGGCCATGTGTCATTCTGTTACATGATTTGTATATGGCCAGAAGAGGGGGGTCTTTGATAGCTGTGAGAGAAAAATACAAGCTACATAAGTTCAAGTGTGTTGCGATGATGCCTTCACCTCCTGAGATACCGTTTTCCTATTTCGAAGAAGCATAGATTGGCAAAAGGATCATTGATAGGTTTTACTTGTTAATTGAAGACATGATTTTGACACTCTTCTGATTGATTGAAAGAATTTTTAGGAAGATGGAAATTTGTTTTCGGCTCTTCAGCAGGCTCTTGTGATTTTGGTGCCTCAAAGATTAGGACCCATATTGTTAATATTAGTTGAAAGATGTTTCCTTTTGATTTTGACAAGTTGGGCATTTTGTAGTTTGTACTCCTTTTTACCTGTAAATTGGAAAGTACTTCCATATGAATAACAATAAAGAATGCATCCGTGGCCTTCTCTTTTCTTTAGAA 1634 41.74 MAATENCARVTRASKKRAATAAVVEGQSANKKRVVLGELSNVQNVNGSVAPQKRKAKSQMTKCKPKKRTKTGVAPTIKKAVVSEDNDPKLTVDDILDDPEMKGPYSSDIYAYLSKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGSDTLYLSISYLDRYLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRRFTNIAQEDFKIPNLQLEFLGYYLAELSLLDYNFVKFLPSMVAASVVFLAKFIIRPKLHPWGPNMQQYTGYKPADLRPCVILLHDLYMARRGGSLIAVREKYKLHKFKCVAMMPSPPEIPFSYFEEA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10133246 10135576 - XM_039029720.1 Bhi04g00390 31999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00390 373 CDD CYCLIN 239 330 IPR013763 -
Bhi04g00390 373 PANTHER CYCLINS 24 372 IPR039361 -
Bhi04g00390 373 SUPERFAMILY Cyclin-like 239 364 IPR036915 -
Bhi04g00390 373 Pfam Cyclin, N-terminal domain 108 236 IPR006671 -
Bhi04g00390 373 Gene3D - 124 237 - -
Bhi04g00390 373 SMART cyclin_7 146 230 IPR013763 -
Bhi04g00390 373 SMART cyclin_7 243 331 IPR013763 -
Bhi04g00390 373 CDD CYCLIN 140 229 IPR013763 -
Bhi04g00390 373 Gene3D - 108 358 - -
Bhi04g00390 373 Pfam Cyclin, C-terminal domain 239 362 IPR004367 -
Bhi04g00390 373 ProSitePatterns Cyclins signature. 141 172 IPR006671 -
Bhi04g00390 373 SMART Cyclin_C_2 239 362 IPR004367 -
Bhi04g00390 373 SUPERFAMILY Cyclin-like 97 236 IPR036915 -
Bhi04g00390 373 PIRSF Cyclin_A_B_D_E 1 366 IPR039361 -
Bhi04g00390 373 PANTHER CYCLIN-A3-1-RELATED 24 372 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00390 Bhi09g03262 CCT
Bhi04g00390 Bhi09g03262 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00390 Bhi-Chr4:10133246 Bhi09g03255 Bhi-Chr9:83471183 4.32E-170 dispersed
Bhi07g00417 Bhi-Chr7:18633863 Bhi04g00390 Bhi-Chr4:10133246 2.65E-16 transposed
Bhi04g00390 Bhi-Chr4:10133246 Bhi09g03254 Bhi-Chr9:83471183 4.32E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00390 K06627 - csv:101206145 696.427