Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00395 AAAAGAAACTAAATTAAATTACATGGTTTAACAAAGACACAAGACAATTCGTACGGTCGATTTTTACAAGGAAATCATATGTAAATTTACATTACAAGCGGCTGTGCCTGCAGGGGCATCTGAGACAGAAATATTCTTCTTCTTATCATTTCAATACAAAGTTAAATCCTTTGTTTGCCGCACTTAGACAATGTAACCCTATTCCTACATCAGTTGCAACTTCCATATTCATCGCAGAATCTGCTCTCATCTAAGATGTTTCAGTTCGTCGAGTTGTCTCTTCCATTCCTTAACTATCTTCTCTTCCCAACAATAATAATCTTCCTCCTCTTCCATTTCCTTCAAACCAAAAACCCCGGCCGGAGGCGCCTCCCACCGAGCCCGGTCGGGGTCTCCTTCCCCATTCTTGGCCATCTCCACCTCCTCAAGAAGCCCCTCCACCGAACTCTCGCAAAACTCTCCACCCAACACGGCCCCATTCTCCTCCTCCACTTTGGCTCCCGCCCCGTCCTACTAGTCTCCTCCCCATCCGCCGCACAAGAATGCCTAACCAAAAACGACATCGCCTTCGCCTCCCGCCCTCGCCTCTCCGTCGGAAAACACCTCGGCTGCAACTATACCTCCCTCCTCTGGGCCCCCTACGGACCCCACTGGCGCAACCAAAGGCGCATCGCCACCCTCCAGATTCTCTCACCCACCCGAATCCAGATGTACGGCAGCGTGAGAACAGAGGAAGTGAAGTTCTTGATCTGCAGGCTGTGCGGAGGCACCGGAGAAAATGGGTTTCGAGCGGTGGAGATGAAGAGGGTGTTTTTCGAGACGGTGCTTAATGTGATGATGAAGATGATCATCGGTAAGCGGTATTGTGGAGAGAGAGAATCAGAGGAGGCTGAGAGATTTAGAAAGATTGTGAAAGAAGGGTTTGAAGTGAGTGGTGCTACGAATATGGGGGACTTTTTGCCAAATTTTGTGAAATGGGTAGGATTGTGGGATGGAATTGAGAAAAGAATGGAGAGATTGCAAGGTCTGAGAGAAAGTTTAATGCAGAATTTGATTGAGGAACGACGAAAGATGAGAAGGGACGATGATGGAGAAATGAAAGGATGCAGAGTAATGGCAGATGTTCTTTTGGATTTACAGGAAATTGAACCTCACTACTACACGGATGCCTTCATTCGAGGCATGATGCAAGGGATGCTATCAGCAGGTACAGACACATCATCAGCAACAATGGAATGGGCACTTTCACTACTACTCAACAACCCACATTCCCTCCTCAAAGCCCAAGCAGAAATCGACGCTCAAGTCGGTCCCAACAGACTCCTTCAAGAATCCGATCTCTCCAACCTACCATTCCTCCACTCTATTCTCAAAGAGACGCTCCGCATTTACCCAGTCGCCCCATTGCTGGTTCCTCACGAATCTTCACAAGACTGCGTCGTTGGAGGCTTCCACGTGCCTCGAGGTACAATGTTGCTTATAAACAACTGGGCCATTCAAAACGACCCCGAATCATGGCCAGACCCATCAGAGTTTAGGCCAGACAGGTTCCAAGCAGGGGAAGTGGAGGAGCTGTGGCGGTGGCTGCCGTTTGGGGCGGGGCGGAGGGGGTGTCCCGGTGAGGGATTGGCGATGCGAATGGTGGGGCTGACTTTGGGGTGTTTAATTCAGTGTTTTGAGTGGCAGACAGCGGGGGAGGAGATGGTGGATATGAGTGAAGGTGGTGGCCTCACAATGCCTAAAGCTAAACCATTGTGGGCAAACTGTAGGCCACGCCCCATTTTGCTCCGTCTTCTGCCCACGCTGTGATGCCTTACCACTCCAAAAACAAAAAGTTCATTATTTTTCACTATCAACTTTCATCTATACATATTTTTACAATATTTGTGAATGTGAATAAAACCAAAGTTCAGGTCAATAGTACAAGTGTAAACTCCTAAACTCAATTTACTAGTTAATTATGCTTAAATTCTCTTAA 1978 47.83 MFQFVELSLPFLNYLLFPTIIIFLLFHFLQTKNPGRRRLPPSPVGVSFPILGHLHLLKKPLHRTLAKLSTQHGPILLLHFGSRPVLLVSSPSAAQECLTKNDIAFASRPRLSVGKHLGCNYTSLLWAPYGPHWRNQRRIATLQILSPTRIQMYGSVRTEEVKFLICRLCGGTGENGFRAVEMKRVFFETVLNVMMKMIIGKRYCGERESEEAERFRKIVKEGFEVSGATNMGDFLPNFVKWVGLWDGIEKRMERLQGLRESLMQNLIEERRKMRRDDDGEMKGCRVMADVLLDLQEIEPHYYTDAFIRGMMQGMLSAGTDTSSATMEWALSLLLNNPHSLLKAQAEIDAQVGPNRLLQESDLSNLPFLHSILKETLRIYPVAPLLVPHESSQDCVVGGFHVPRGTMLLINNWAIQNDPESWPDPSEFRPDRFQAGEVEELWRWLPFGAGRRGCPGEGLAMRMVGLTLGCLIQCFEWQTAGEEMVDMSEGGGLTMPKAKPLWANCRPRPILLRLLPTL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10316436 10318517 + XM_039028317.1 Bhi04g00395 32004

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00395 517 Coils Coil 252 272 - -
Bhi04g00395 517 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 Pfam Cytochrome P450 45 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 PANTHER CYTOCHROME P450 82C3-RELATED 20 514 - -
Bhi04g00395 517 PANTHER CYTOCHROME P450 81E8 20 514 - -
Bhi04g00395 517 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi04g00395 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00395 - - - csv:101220916 872.848
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00395 Bhi09g03252 CCT
Bhi04g00395 Bhi09g03252 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00395 Bhi-Chr4:10316436 Bhi09g03252 Bhi-Chr9:83402135 0 dispersed
Bhi03g00974 Bhi-Chr3:18740027 Bhi04g00395 Bhi-Chr4:10316436 1.17E-152 wgd
Bhi04g00395 Bhi-Chr4:10316436 Bhi09g03251 Bhi-Chr9:83382371 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g686 . . . . . . . Bma01g02256 . . . Cma09g00271 . . . Cpe06g00187 . Bhi04g00395 . . . . . Lcy13g2119 . . . . . . . . . . . . Csa04g02459 . . . . . . . . . . . . Cmo09g00267 . . . . . . Bhi09g03252 . . . . Mch11g0343 . . . . . . . . . . Chy07g00173 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00395 Bhi_Chr04 FPKM 16.561403 30.530161 21.544664 21.907942 15.252782 9.779172 14.22701 14.796592 14.391488 17.620859