Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00411 ATGGAGGCTTTGGGAGGTTTTTTCGATGGGGAATGGGAATCTTTCGCCGCCTTATTCTCATCGGAAGAGATAAATCAGACCCATATTCCGGTGGCTAATCATTGTTCCAGTGAGCTTCCATCGCCCAACAATGGTGTCAACAGCTGGTTCTATTCATTGGATGCTTTTGTTCCTAATTTGCAGAGCAATTGTAAACAGGACATAAGGAGTTGTAGTAGCTGCAGTACTACTGATCATTCTAATGCTTCAGTTTCGATTCCGAATTCGAGTGATTTTTTTATGCCAATTGATGAGAGGAATTTCGGGTCTTTGTTTTTTTCTGATGTTTTAATCGAGGAAATCGATAATGCTCTTGCCACCGCCACCGCCGCCGCTGACGGGGAAGATTCTAGCGCAGAGAGATTCATTGAGCACAATGTACTACAAGGTAGCCACCCTCCGCCGTCGCAGCTGGTAGATTCCACCGGTGCCGGAAACAAACCAATTGCATTGAAGAGGAAAGTCAATAATGGAGACATTTCTGACGATCAGAAGAAGAAAACTCGGATTTCCTCACATGGGCAGAGGAAGAAGAAAACAGAGAAGAGAATAGGGGCAAGTGTAGAGGAAGAAGGGAATACAGGTGGAGCATCAGAAGGACAGAGCTCCATTAGTTACAGTTCAGATCAGGAAGAGAATGATTCCGAGGAGGGAAACGGCGGTGGCTCGGCCGCCACCTCCGACAGCGGCTTGAACAGGAAAAGCAGAGCAAGCAGAGGGTCGGCCACGGATCCCCAAAGCCTCTACGCTAGAAAACGAAGGGAAAGAATCAATGAGCGATTGAGAATCTTACAGAAACTTGTTCCAAATGGAACCAAGGTTGATATCAGTACCATGCTTGAAGAAGCAGTTCATTATGTCAAGTTTTTGCAGCTCCAAATCAAGTTATTGAGCTCAGATGAGATGTGGATGTTTGCTCCTTTGGCTTACAATGGAATGGACCTTGGCCTTCAACAGAACCTCTCTCCATTTCTATCACATTGAGACACATTTTTATTTCCCTTTTTACCCTTGTATTGTTTAATTAACTCAATATAATTAAGCTATATATATATAAATATTTTGATCCTAAGTTTAATAACATTATAATCATGAGGA 1137 43.27 MEALGGFFDGEWESFAALFSSEEINQTHIPVANHCSSELPSPNNGVNSWFYSLDAFVPNLQSNCKQDIRSCSSCSTTDHSNASVSIPNSSDFFMPIDERNFGSLFFSDVLIEEIDNALATATAAADGEDSSAERFIEHNVLQGSHPPPSQLVDSTGAGNKPIALKRKVNNGDISDDQKKKTRISSHGQRKKKTEKRIGASVEEEGNTGGASEGQSSISYSSDQEENDSEEGNGGGSAATSDSGLNRKSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEMWMFAPLAYNGMDLGLQQNLSPFLSH 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10618267 10620834 + XM_039029846.1 Bhi04g00411 32020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00411 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 303 IPR011598 GO:0046983
Bhi04g00411 340 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 337 - -
Bhi04g00411 340 MobiDBLite consensus disorder prediction 207 222 - -
Bhi04g00411 340 Gene3D - 256 319 IPR036638 GO:0046983
Bhi04g00411 340 MobiDBLite consensus disorder prediction 141 266 - -
Bhi04g00411 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 254 316 IPR036638 GO:0046983
Bhi04g00411 340 CDD bHLH_AtIND_like 255 317 - -
Bhi04g00411 340 MobiDBLite consensus disorder prediction 230 258 - -
Bhi04g00411 340 Pfam Helix-loop-helix DNA-binding domain 264 304 IPR011598 GO:0046983
Bhi04g00411 340 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 5 337 - -
Bhi04g00411 340 SMART finulus 260 309 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00411 Bhi09g03235 CCT
Bhi04g00411 Bhi09g03235 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00411 Bhi-Chr4:10618267 Bhi03g01358 Bhi-Chr3:28323433 4.44E-19 dispersed
Bhi05g01280 Bhi-Chr5:45903363 Bhi04g00411 Bhi-Chr4:10618267 2.96E-12 dispersed
Bhi02g00893 Bhi-Chr2:18973805 Bhi04g00411 Bhi-Chr4:10618267 3.07E-23 transposed
Bhi05g01043 Bhi-Chr5:37142172 Bhi04g00411 Bhi-Chr4:10618267 4.81E-59 transposed
Bhi11g01138 Bhi-Chr11:33718223 Bhi04g00411 Bhi-Chr4:10618267 7.60E-59 transposed
Bhi12g01258 Bhi-Chr12:37466784 Bhi04g00411 Bhi-Chr4:10618267 5.55E-25 transposed
Bhi03g02167 Bhi-Chr3:47069768 Bhi04g00411 Bhi-Chr4:10618267 3.35E-19 transposed
Bhi04g00411 Bhi-Chr4:10618267 Bhi09g03235 Bhi-Chr9:83139325 2.22E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
867 PF00010 HLH 1.00E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00411 - - cmax:111491997 469.159