Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00427 AAAGTGAAGTGTGAAGGGTTTGAAAGTGATGCTCCATCACGTGAAGTGTCAGCGGGACTTAGCAATTGCAATTTGCAACCACCTTCCTATGGCCCTATGATGGACAGCGCTGATTGCTAGGGCTCTTTGGGCCACCTCCAAATCATTATAATGGTAGATTTTCAGTACAAACATAAATTCTCCCTCAATAATGTTTTCCCAATAATGGTCCGATTTTCCAAAAGCTTCAATCGCCATTGTGTAAATTGTAATTCAAACAAATTTGGGGAAGATACTGCGCCGATCATCGACAGCCAATGTTCAAAACTAATGGGTTTGTGGGGTTCTCTGTTTCCATCAAAGCTGTAAAGATTCTGAATTACAAAGTGCTGGACGGAAGCTCGTTTTGCAGAATGGACGCATAGCGACAATTTCAGATCTCAGACCCACTTCTCTTGGGGAGCTCTGTTTGAAGCGGAGGAGAAAAGAGGGTTAAATTTGAATCGCCATTTTCGGCCGTGATTAGTTTGTTTCACTGTTTGTGCATCGATTAGCGTGTTTGACGTCTGGAAACAAAAAGTAGTAGGAAAAGGAAGGAAGTTCAGAGATCAGTCAAAAAGTGATTAGCAACCATAATCTAAGCATACGCCAGGGATTACTCATAACGCCCATTCGATTCAAGCTGACAGGTGGAAATATCACGTGCTGTTCATTCCATCACCCTCTGGCTGGTGTTGGTTGCTCCACTGTATGGAAGGCACTATGAATTAAATTAATAGAATTTGTACACGCCGTTCCCTATACTGTAAAAGTAAAACGAAGGTCCTCTTTTCCAGTTTACTTAACTCGAAACTCGAACCCCAGAGTTCAAATACCACAATACACACAAACTGACGGGGGAAGAATAATAACCTGAGAAAGACCATCAAAGTTCTCAATCTATTTTGGAAAAGATGCTGTGCGCTTGTTCAGGAGAGCAATTCAAGTTCGAAGAGCCACCGCAGTCTCCAGAGTCACTTGCGACGAGAGATTTCTCGGCCAGTTGCCTTTCCTCGAGAACTGGAGACTGGGATTTAAAATTTGAAGACTCTCAAGTAGATGAAGTTGAATCCACTTTAAGAGAAGCCCTCTCATTAAACTACGAGGAAGCCAGAGCTTTGCTGGGGAGGCTGGAATACCAAAGAGGAAATTTTGATGCTGCCCTACAGGTATTTCAAGGTATAGACATTAGATCTTTAACACCAAGAATGGTTAAGGCAATTACTGAAAAGACAAGGGAGGAAAAGCCTCGTCCTAAAGGTGAAAGTGCCCCCCCTAGTGGGGTAATGTCCATGCATTCTGTTAGCCTACTACTTGAAGCAATTTTACTCAAGGCAAAATCACTGGAGGAACTTGGCAGATATATAGAGTCAGCAAAAGAGTGCAGGATAATCCTTGATACAGTGGAATCAGCTCTGCCTAATGGAATGCCCGAAAACATTGGTGAAGACTGCAAATTGCAGGAAATGTTTCACAAAGCTTTGGAATTACTACCTACTTTGTGGATTAAGGGAGGGTATCTGGATGAGGCCATAAACGCCTATCGCCGTGTCCTTGTTAAACCATGGAATCTTGATCCAAACAAGTTGGCTGCCATACAGAAAGAATTGGCCGGGACATTACTCTATGGAGGTGTTGAAGCAAGCCTTCCCCTTAAGTTTCATGTATTTGGCCCAAGAACGCCTAAAAACAATGTAGAAGAAGCAATCCTTCTGTTGCTAATACTCATGAGGAAAGTGGTGATGCAAGAAATAAACTGGGATCCTGAGATTATGAATCATCTGACTTATGCACTTTCTATCTCAAGACAATTTGAATTACTCGCTGAGCATGTTGAGCGGATCCTTCCTGGAATTTATAGTCGAGCTGAGAGGTGGTACTTTCTTGCTCTATGTTATAATGCTGCAGGACAGAATGAAGCAGCTTTGAACCTTCTAATGAAAGTTTGCGGTTCCTCTGAAGTAAAGCACAAGCCCAATTTTCATTCTTTTTTGTTGCTTGCAAAATTGTGTTCAGAGGATATGAAATATGCACGTGATGGAATTAAATTTTCTCATAGAATGATCGATATGGCCAGTGAACAAGGTAAGCATTTCAATCCTGAAGCCCACAAATTTTTAGGTGTTTGCTATGGGAATGCAGCTAGAGCGTCTGTGTCAGACTCTGAAAGAACTCTTTTCCAAAAAGAATCATTGAACTCCTTACAAGTTTCTTCTCTCGATAGGAGTCATGATCCAGAAGTAATGTTCAACATTAGCTTGGAAAATGCTGTGCAGAGAAATCTTGATGTTGCATTCTACAGTGCAATGGCGTACTCAAATATGGTGGCTGATGGCTCTGGAAGAGGTTGGAAGCTTTTGACCCTCATACTTTCAGCTGAGAAGCGACTCAAGGATGCTGAAACCATAGTTGATTTTGCTTTGGATGAAGCCGAGAGGATGGATCAATTGGATTTTCTTCGATTGAAAGCTGTCCTTAAAATTGCTCAGGAACAGCCAAAGCAAGCAATAGAAACCTACAGAATCTTGCTAGCACTAATTCAAGCACGAGATGAACTTCAGCTTCAGGCTAAGAACTTTGACCAATCCAAAGACTTGGAACTGGAGGCAATGGCAGAACGTAACTTGGAACGGGCAGTCTGGCAGGATTTGGCTGCCATATACTCAAAACTTGCTTCCTGGGCAGATGCAGAAATCTGTCTGAACAAAGCCAAGTCATTAGATGTTCATTGCCCCAGAGGTTGGCATACAACAGGCAAGTATTTTGAAGCTCGATCATTACACAAGGAAGCCCTTGTTTCATTCTCTGTTTCTCTGTCGATCAATCCTGATTATATTCCGAGTATCATCTCAACAGCAGAAGTATTGATGAAATGCGGTAACCAATCACTTCCAATTGCACGTAGCTTGTTGATGAATGCTGTAAGATTGGATCCTACAAGCCATGAAGCATGGTTCAACCTTGGAGTGCTTTCCAAAATGGAAGGTCTGTTGCTACAAGCTGCAGACTTTTTTCAAGCTGCACATGAACTCCAACTATCTGCTCCTCTTCAGAGTTTCGTCTAAAAGAATATTCGTTGGTCACCTTTGGAGCTTGGTAAGTTTAGCAGATATGGAAGTTCAAGTATTGCCTTGGTTGTGCCACCAGCATATTCCCATCAATCTTCTTTCCTTCTGCATTCTTTTCCTTGACCACTCATTATCTGTTCAAAGCTGAAGGAATGTTGGACCAACACTTACCAAGATTTTAGGGTAGTCATATGGTTCCAAATTCTCCAAATTCTAATCAACTGATTTTGTGTAGCGAATCAAGGATTTAGTAGAGTATTAAGTAAATAGCATTTTTCTTTTCT 3370 41.75 MLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWDLKFEDSQVDEVESTLREALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLTPRMVKAITEKTREEKPRPKGESAPPSGVMSMHSVSLLLEAILLKAKSLEELGRYIESAKECRIILDTVESALPNGMPENIGEDCKLQEMFHKALELLPTLWIKGGYLDEAINAYRRVLVKPWNLDPNKLAAIQKELAGTLLYGGVEASLPLKFHVFGPRTPKNNVEEAILLLLILMRKVVMQEINWDPEIMNHLTYALSISRQFELLAEHVERILPGIYSRAERWYFLALCYNAAGQNEAALNLLMKVCGSSEVKHKPNFHSFLLLAKLCSEDMKYARDGIKFSHRMIDMASEQGKHFNPEAHKFLGVCYGNAARASVSDSERTLFQKESLNSLQVSSLDRSHDPEVMFNISLENAVQRNLDVAFYSAMAYSNMVADGSGRGWKLLTLILSAEKRLKDAETIVDFALDEAERMDQLDFLRLKAVLKIAQEQPKQAIETYRILLALIQARDELQLQAKNFDQSKDLELEAMAERNLERAVWQDLAAIYSKLASWADAEICLNKAKSLDVHCPRGWHTTGKYFEARSLHKEALVSFSVSLSINPDYIPSIISTAEVLMKCGNQSLPIARSLLMNAVRLDPTSHEAWFNLGVLSKMEGLLLQAADFFQAAHELQLSAPLQSFV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10875533 10880619 + XM_039029179.1 Bhi04g00427 32036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00427 716 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Bhi04g00427 716 Gene3D Tetratricopeptide repeat domain 261 540 IPR011990 GO:0005515
Bhi04g00427 716 Gene3D Tetratricopeptide repeat domain 37 260 IPR011990 GO:0005515
Bhi04g00427 716 MobiDBLite consensus disorder prediction 104 124 - -
Bhi04g00427 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Bhi04g00427 716 SMART tpr_5 573 606 IPR019734 GO:0005515
Bhi04g00427 716 SMART tpr_5 318 351 IPR019734 GO:0005515
Bhi04g00427 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Bhi04g00427 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Bhi04g00427 716 Coils Coil 485 505 - -
Bhi04g00427 716 SUPERFAMILY TPR-like 513 688 IPR011990 GO:0005515
Bhi04g00427 716 SUPERFAMILY TPR-like 46 340 IPR011990 GO:0005515
Bhi04g00427 716 Gene3D Tetratricopeptide repeat domain 541 712 IPR011990 GO:0005515
Bhi04g00427 716 PANTHER PROTEIN NPGR1 1 716 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00424 Bhi-Chr4:10875533 Bhi04g00427 Bhi-Chr4:10875533 0 dispersed
Bhi04g00425 Bhi-Chr4:10875533 Bhi04g00427 Bhi-Chr4:10875533 0 dispersed
Bhi04g00427 Bhi-Chr4:10875533 Bhi04g00429 Bhi-Chr4:10875533 0 dispersed
Bhi04g00426 Bhi-Chr4:10875533 Bhi04g00427 Bhi-Chr4:10875533 0 tandem
Bhi04g00427 Bhi-Chr4:10875533 Bhi04g00428 Bhi-Chr4:10875533 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00427 K21843 - csv:101209448 1332.01