Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00444 GATTATTTTCTTTTTCTTCGTCGGATCTCAACTCACCCGTACGAACGAACTCAGAATTTGGAAGCTGTATGTGGATGCAACTCCACTCTCGCTTTCAGTGAAACCACCCATTCAGAAATGGAGGACGCCTACGCCAGATCTATCACTGAGGTCTTGGATTTCTTTGGGGTTGACCCATCACAAGGTCTCACAGATGATCAGGTTTTACATCATGCTAAACTTTATGGAAAAAACTTGGTACCCGAGGAGAAAAGGGCCCCATTTTGGAAATTGGTTTTGAAGCAGTTCGATGATTTACTAGTGAAGATATTAATTGTCGCGGCAGTTGTTTCTTTCCTTTTAGCTTTGATAAATGGAGAGACAGGTGTAACGGCATTTATGGAGCCTTCTGTAATTCTAATGATATTGGCTGCAAACGCAGCAGTAGGGGTGATTACAGAAACGAATGCTGAAAAGGCTCTTGTGGAACTACGGGCATACCAGGCAGAAATTGCTACTGTGATGAGAAATGGTTGCTTTTCAATACTTCCGGCTACTGAGCTTGTTCCTGGCGATATTGTAGAAATTGCTGTGGGGTGCAAAATTCCAGCTGATATGAGAATGATTGAGATGCTGACTAATCAGCTACGTGTTGATCAAGCAATTCTCACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTCGAGTCTACAAGAGCAGCAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGTACAGTGGTGGTTGCTGGCAGGGCACGTGCTATTGTGGTAGGAGTTGGTGCAAATACTGCCATGGGCAATATACGAGATTCTATATTGCAAACTGATGATGAGGTGACACCGTTGAAAAAAAAGCTCGATGAATTTGGTACCTTTCTGGCCAAGGTTATTGCTGGAATTTGTGTACTTGTATGGATAGTGAACATTGGTCACTTCCGTGATCCTTCACATGGTGGGGTTTTGAGTGGTGCTATACATTACTTCAAGATTGCAGTTGCTCTCGCTGTTGCAGCTATTCCTGAAGGACTTCCTGCTGTTGTCACAACGTGTTTGGCTCTTGGCACCAAACGAATGGCACGTCTGAATGCAATTGTAAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACCACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACCAATATGATGTCCGTCTCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCTGAGTACAATGTCAGCGGTACAACATATGCTCCTGATGGTATTATTTTTGACAGCTCGGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACATATGGCGATGGGGTCTGCCCTCTGCAACGAGTCTACTTTGCAATATAATCCAGACAAGGGAAGCTACGAAAAAATTGGTGAATCAACTGAAGTAGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCTATGCCTTCAGCTCTAAATATGCTCAGCAAGCATGAGCGTGCATCCTATTGTAACCACCATTGGGAGAGCCAGTTCAAAAAGATTTCTGCATTGGAATTTTCTCGCGATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATTCTATTCTCCAAGGGTGCTCCTGAGAGCATTATTTCAAGATGCTCAAGCATCCTTTGTAATGAAGATGGTTCCACCAGTGTCTTAACTTCTAGTATTCGCACTGAACTGGAAGCAAGATTTCAAAGTCTTGCTGGAAATGAAATGCTTAGGTGCCTGGCTATAGCATTCAAATTGCTTCCTCTGAGTCAGCAGAGTTTAACCGTTAACGATGAGCAAGATCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGCATGACTGCCGGCATACGTGTTATAGTTGTAACTGGGGACAATAAGTCAACTGCCGAATCACTCTGTCGCAAGATTGGTGCTTTTGATCACTTGGTGGATCTAACTGGTCATTCTTATACGGCTTCCGAATTTGAAGAGCTACCTGCAATGCAACAAACAACGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCATAAGAGAATGCTTGTGGAGGCCTTACAACATCAAAATGAAGTGGTTGCTATGACAGGCGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCAGATATTGGAATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCTGATATGGTCTTAGCTGATGACAATTTTGCTACTATTGTGGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTCTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACACTTGCCCCTGTGCAACTTCTTTGGGTCAACTTGGTCACTGATGGGTTGCCTGCAACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAAGCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGGTGGTTGTTCTTTCGTTATTTGGTAATTGGAGCTTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCGGACAGTGGTCCTAAGCTAAATTACACTGAGTTGATGAATTTTGATACTTGCTCAACCAGAGAGACGGCATACTCTTGCAATATATTTGAGGATCGGCATCCATCGACTGTGTCTATGACTGTGCTTGTTGTTGTCGAGATGTTCAATGCTTTAAATAATCTAAGTGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCTTAACCATGATCCTTCACATGCTTATTATGTATGTGCAACCTCTCGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTATCTTTCATTTCCTGTTATAATCATTGATGAGGTACTAAAATGCTTTTCGCGACGCTCTAGTGGCACTGGCAGGTTGAGGCTTCCATTCAGATTCAGAAGGCATGATTTACTTCCAAAGAAGGAATTGCATGACAAGTAGGAATCATTACCTTGTTATACTCGAGTATGGCTGATTAACAAGGACAAAAATTGACATCATTCTTTTATCCCATCCAACCTGGAGAGTTCGACCCGAGCATTCACACATTAATCTTATACCTCTCAAGTCCAAAGTTTAACAGCACTCTACACTACGGGTCAGTTAATAATATCATCACATCACAACAATCATGAAGAGTAACCGGCAAAGATGAATGTGCTGGTCAGAAATTTGCTGGTACTAATCTTTTTTGTTTGAACCGTCAATTTGAAGTTTATTCAAACAAGAATATTTACGTTGTTGATTTTGGAATTTTATTCATATAGCAAGTCTTGATAGAACAATGTTCACTGCAATTCATAATATCGATCCCTCCGTGGACGAGCTTTTGTCAAATAGGTTTAATTTCATAGATGATTGGTATGGGGGTTCTGGTTTCAGCATTCTGTTGGTTCCTTGTAAAGGGGAACATTTCAAAATGAAAGAATGATACAAGTTGTCTGTTCAATTGCACCGTTATGTATCCAAGTTTTTTCTTACCAAAAGGGAAATAGACTGTAAATTCAGACGACTA 3706 41.69 MEDAYARSITEVLDFFGVDPSQGLTDDQVLHHAKLYGKNLVPEEKRAPFWKLVLKQFDDLLVKILIVAAVVSFLLALINGETGVTAFMEPSVILMILAANAAVGVITETNAEKALVELRAYQAEIATVMRNGCFSILPATELVPGDIVEIAVGCKIPADMRMIEMLTNQLRVDQAILTGESCSVEKELESTRAANAVYQDKTNILFSGTVVVAGRARAIVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGVLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVSKICVVHSVLHGPQLSEYNVSGTTYAPDGIIFDSSGVQLEFPAQLPCILHMAMGSALCNESTLQYNPDKGSYEKIGESTEVALRVFAEKVGLPGFTSMPSALNMLSKHERASYCNHHWESQFKKISALEFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTSVLTSSIRTELEARFQSLAGNEMLRCLAIAFKLLPLSQQSLTVNDEQDLTFIGLVGMLDPPREEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLTGHSYTASEFEELPAMQQTTALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDSGPKLNYTELMNFDTCSTRETAYSCNIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVLTMILHMLIMYVQPLAVLFSVTPLSWAEWTMVLYLSFPVIIIDEVLKCFSRRSSGTGRLRLPFRFRRHDLLPKKELHDK 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11071530 11117026 + XM_039030315.1 Bhi04g00444 32053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00444 1004 SUPERFAMILY HAD-like 578 739 IPR036412 -
Bhi04g00444 1004 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 2 981 - -
Bhi04g00444 1004 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 352 589 IPR023299 GO:0000166
Bhi04g00444 1004 Gene3D - 355 592 IPR023299 GO:0000166
Bhi04g00444 1004 Pfam Cation transporter/ATPase, N-terminus 6 72 IPR004014 -
Bhi04g00444 1004 SFLD p-type atpase 326 743 IPR044492 -
Bhi04g00444 1004 Coils Coil 111 131 - -
Bhi04g00444 1004 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 92 366 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00444 1004 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 661 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00444 1004 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Bhi04g00444 1004 Pfam haloacid dehalogenase-like hydrolase 582 705 - -
Bhi04g00444 1004 Gene3D - 55 976 - -
Bhi04g00444 1004 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 978 IPR023298 -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 585 596 - -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 607 617 - -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 691 710 - -
Bhi04g00444 1004 PRINTS P-type cation-transporting ATPase superfamily signature 714 726 - -
Bhi04g00444 1004 PANTHER CALCIUM-TRANSPORTING ATPASE 2 981 - -
Bhi04g00444 1004 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Bhi04g00444 1004 CDD P-type_ATPase_SERCA 5 976 - -
Bhi04g00444 1004 Pfam Cation transporting ATPase, C-terminus 775 974 IPR006068 -
Bhi04g00444 1004 Gene3D - 342 735 IPR023214 -
Bhi04g00444 1004 Pfam E1-E2 ATPase 122 324 - -
Bhi04g00444 1004 PRINTS H+-transporting ATPase (proton pump) signature 663 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00444 1004 PRINTS H+-transporting ATPase (proton pump) signature 691 707 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00444 1004 PRINTS H+-transporting ATPase (proton pump) signature 722 747 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00444 1004 Gene3D - 22 237 - -
Bhi04g00444 1004 SFLD C1.7: P-type atpase like 326 743 - -
Bhi04g00444 1004 Pfam Cation transport ATPase (P-type) 415 524 - -
Bhi04g00444 1004 SUPERFAMILY Calcium ATPase, transduction domain A 124 235 IPR008250 -
Bhi04g00444 1004 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 53 845 IPR005782 GO:0005388|GO:0006816|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00444 Bhi-Chr4:11071530 Bhi08g00646 Bhi-Chr8:21867128 0 dispersed
Bhi04g00444 Bhi-Chr4:11071530 Bhi04g00445 Bhi-Chr4:11079591 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00444 K05853 - csv:101211345 1894.78