Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00445 ATTTGTTGCTCAGGGGAGAAGGAAAAAGTGTGTTGCTTTTGCAAATCGTTGTATGGGTTGAAACAAAGTTCACGAGCATGGTTTGGAAAATTTAGTCAGGCACTTGAGCAATTTGGAATGAAGAAAAACAGGAACTACGGGCATACCAGGCAGAAATTGCTACTGTGATGAGAAATGGTTGCTTTTCAATACTTCCGGCTACTGAGCTTGTTCCTGGCGATATTGTAGAAATTGCTGTGGGGTGCAAAATTCCAGCTGATATGAGAATGATTGAGATGCTGACTAATCAGCTACGTGTTGATCAAGCAATTCTCACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTCGAGTCTACAAGAGCAGCAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGTACAGTGGTGGTTGCTGGCAGGGCACGTGCTATTGTGGTAGGAGTTGGTGCAAATACTGCCATGGGCAATATACGAGATTCTATATTGCAAACTGATGATGAGGTGACACCGTTGAAAAAAAAGCTCGATGAATTTGGTACCTTTCTGGCCAAGGTTATTGCTGGAATTTGTGTACTTGTATGGATAGTGAACATTGGTCACTTCCGTGATCCTTCACATGGTGGGGTTTTGAGTGGTGCTATACATTACTTCAAGATTGCAGTTGCTCTCGCTGTTGCAGCTATTCCTGAAGGACTTCCTGCTGTTGTCACAACGTGTTTGGCTCTTGGCACCAAACGAATGGCACGTCTGAATGCAATTGTAAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACCACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACCAATATGATGTCCGTCTCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCTGAGTACAATGTCAGCGGTACAACATATGCTCCTGATGGTATTATTTTTGACAGCTCGGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACATATGGCGATGGGGTCTGCCCTCTGCAACGAGTCTACTTTGCAATATAATCCAGACAAGGGAAGCTACGAAAAAATTGGTGAATCAACTGAAGTAGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCTATGCCTTCAGCTCTAAATATGCTCAGCAAGCATGAGCGTGCATCCTATTGTAACCACCATTGGGAGAGCCAGTTCAAAAAGATTTCTGCATTGGAATTTTCTCGCGATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATTCTATTCTCCAAGGGTGCTCCTGAGAGCATTATTTCAAGATGCTCAAGCATCCTTTGTAATGAAGATGGTTCCACCAGTGTCTTAACTTCTAGTATTCGCACTGAACTGGAAGCAAGATTTCAAAGTCTTGCTGGAAATGAAATGCTTAGGTGCCTGGCTATAGCATTCAAATTGCTTCCTCTGAGTCAGCAGAGTTTAACCGTTAACGATGAGCAAGATCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGCATGACTGCCGGCATACGTGTTATAGTTGTAACTGGGGACAATAAGTCAACTGCCGAATCACTCTGTCGCAAGATTGGTGCTTTTGATCACTTGGTGGATCTAACTGGTCATTCTTATACGGCTTCCGAATTTGAAGAGCTACCTGCAATGCAACAAACAACGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCATAAGAGAATGCTTGTGGAGGCCTTACAACATCAAAATGAAGTGGTTGCTATGACAGGCGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCAGATATTGGAATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCTGATATGGTCTTAGCTGATGACAATTTTGCTACTATTGTGGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTCTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACACTTGCCCCTGTGCAACTTCTTTGGGTCAACTTGGTCACTGATGGGTTGCCTGCAACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAAGCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGGTGGTTGTTCTTTCGTTATTTGGTAATTGGAGCTTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCGGACAGTGGTCCTAAGCTAAATTACACTGAGTTGATGAATTTTGATACTTGCTCAACCAGAGAGACGGCATACTCTTGCAATATATTTGAGGATCGGCATCCATCGACTGTGTCTATGACTGTGCTTGTTGTTGTCGAGATGTTCAATGCTTTAAATAATCTAAGTGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCTTAACCATGATCCTTCACATGCTTATTATGTATGTGCAACCTCTCGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTATCTTTCATTTCCTGTTATAATCATTGATGAGGTACTAAAATGCTTTTCGCGACGCTCTAGTGGCACTGGCAGGTTGAGGCTTCCATTCAGATTCAGAAGGCATGATTTACTTCCAAAGAAGGAATTGCATGACAAGTAGGAATCATTACCTTGTTATACTCGAGTATGGCTGATTAACAAGGACAAAAATTGACATCATTCTTTTATCCCATCCAACCTGGAGAGTTCGACCCGAGCATTCACACATTAATCTTATACCTCTCAAGTCCAAAGTTTAACAGCACTCTACACTACGGGTCAGTTAATAATATCATCACATCACAACAATCATGAAGAGTAACCGGCAAAGATGAATGTGCTGGTCAGAAATTTGCTGGTACTAATCTTTTTTGTTTGAACCGTCAATTTGAAGTTTATTCAAACAAGAATATTTACGTTGTTGATTTTGGAATTTTATTCATATAGCAAGTCTTGATAGAACAATGTTCACTGCAATTCATAATATCGATCCCTCCGTGGACGAGCTTTTGTCAAATAGGTTTAATTTCATAGATGATTGGTATGGGGGTTCTGGTTTCAGCATTCTGTTGGTTCCTTGTAAAGGGGAACATTTCAAAATGAAAGAATGATACAAGTTGTCTGTTCAATTGCACCGTTATGTATCCAAGTTTTTTCTTACCAAAAGGGAAATAGACTGTAAATTCAGACGACTA 3372 41.46 MRNGCFSILPATELVPGDIVEIAVGCKIPADMRMIEMLTNQLRVDQAILTGESCSVEKELESTRAANAVYQDKTNILFSGTVVVAGRARAIVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGVLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVSKICVVHSVLHGPQLSEYNVSGTTYAPDGIIFDSSGVQLEFPAQLPCILHMAMGSALCNESTLQYNPDKGSYEKIGESTEVALRVFAEKVGLPGFTSMPSALNMLSKHERASYCNHHWESQFKKISALEFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTSVLTSSIRTELEARFQSLAGNEMLRCLAIAFKLLPLSQQSLTVNDEQDLTFIGLVGMLDPPREEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLTGHSYTASEFEELPAMQQTTALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDSGPKLNYTELMNFDTCSTRETAYSCNIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVLTMILHMLIMYVQPLAVLFSVTPLSWAEWTMVLYLSFPVIIIDEVLKCFSRRSSGTGRLRLPFRFRRHDLLPKKELHDK 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11079591 11117026 + XM_039030316.1 Bhi04g00445 32054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00445 876 Pfam haloacid dehalogenase-like hydrolase 454 577 - -
Bhi04g00445 876 Pfam Cation transporting ATPase, C-terminus 647 846 IPR006068 -
Bhi04g00445 876 Pfam Cation transport ATPase (P-type) 287 396 - -
Bhi04g00445 876 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 10 853 - -
Bhi04g00445 876 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 533 651 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00445 876 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 10 239 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00445 876 Gene3D - 214 607 IPR023214 -
Bhi04g00445 876 Gene3D - 227 464 IPR023299 GO:0000166
Bhi04g00445 876 ProSitePatterns E1-E2 ATPases phosphorylation site. 219 225 IPR018303 -
Bhi04g00445 876 Gene3D - 2 109 - -
Bhi04g00445 876 SUPERFAMILY HAD-like 450 611 IPR036412 -
Bhi04g00445 876 Gene3D - 110 848 - -
Bhi04g00445 876 PRINTS H+-transporting ATPase (proton pump) signature 535 551 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00445 876 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00445 876 PRINTS H+-transporting ATPase (proton pump) signature 594 619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi04g00445 876 SUPERFAMILY Calcium ATPase, transduction domain A 2 107 IPR008250 -
Bhi04g00445 876 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 11 717 IPR005782 GO:0005388|GO:0006816|GO:0016021
Bhi04g00445 876 SFLD p-type atpase 198 615 IPR044492 -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 45 59 - -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 217 231 - -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 457 468 - -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 479 489 - -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 563 582 - -
Bhi04g00445 876 PRINTS P-type cation-transporting ATPase superfamily signature 586 598 - -
Bhi04g00445 876 SFLD C1.7: P-type atpase like 198 615 - -
Bhi04g00445 876 SUPERFAMILY Calcium ATPase, transmembrane domain M 109 850 IPR023298 -
Bhi04g00445 876 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 224 461 IPR023299 GO:0000166
Bhi04g00445 876 Pfam E1-E2 ATPase 2 196 - -
Bhi04g00445 876 PANTHER CALCIUM-TRANSPORTING ATPASE 10 853 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00445 Bhi-Chr4:11079591 Bhi08g00646 Bhi-Chr8:21867128 0 dispersed
Bhi04g00444 Bhi-Chr4:11071530 Bhi04g00445 Bhi-Chr4:11079591 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00445 K05853 - csv:101211345 1659.04